CI01000040_04442810_04474877 (MAP4K6)


Basic Information

Item Value
gene id CI01000040_04442810_04474877
gene name MAP4K6
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 4441797 ~ 4475124 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_04442810_04474877.mRNA
ATATAAATATTAGGGTGCCCATATATATATTTATTTAATTCCTGTCCTATGTATTCAATTCACGCAAAGTTGGAGCAGGAAGTTCTCAAAGCACCCGCACAGTCTCACGAATTAATATTGCCGGTAGGTGGCACTCGTACACTAAACTCTGTTTTTTAAACAACACTCCATTGTTGTTTGAATAAAAGGAAAATATTTGTATTTTATATTTGTTATAAAGTACATTATTAAATATCTAATATATCTTAATAGCCTACTGATATCATATATCACCTAATTTTGTCGTCTATTATGTTTTAAGACTTGCTGATGGAAATTTAATTTAAATTCTGTCTTCCTCATTCAGTGTTTTTTTTTTTTGTCAAAGATTTTTAATATCTAATATAAATATAGTAAGATTAAGCATAATATAAGCCTAATATTTCAGCGAAATTAAAACTAGCCAATAGTAGGCTATAAAGTCCCTTATTTTGCCCTTTGTGTTTAACTTGAACCTAATTTAAACGTTTTAATCTAAACTTTCTGCATAACGTTAGACGTAGGCCTATTTGATCGTTCCGTCGCGTTTAGCTGATTTTTTCAGCGTTGCGTTTTTAAAGACGTCATGTCAAGATCAACGCGTCTTGAGACCCTGTAGTTGTTTTTCTAGCAATTTTTTATTAAACCATGTACAAAATGAGTACAAACTTATAGGCTACAATCTCACAAATAAAAAGTGCCTAATGTGTCTTTCTTGGTTTTTGCTTTCTAAATTCATTTAAAGCAGATCAGCTCCACATTGTTTCATTTTGGCGTTCTGTGCCATCCTGTTGCGCTCTGTGAACGCGTCTTGTGTGAACGCCCCCTGTCTTCAGCAGCGTGCGCACAGAGAGGTGCGTTTGTCATCGCTGCCATGTTCACTCTAGTGCACTTGTTACGCGGATGTTGAGGAAGTGGTGGTTAGTGGCATTTGGATGAGTATCATCCGCTCTTGATTCATTACCGTGAGAAAACGAATCAAATGCCGCGCTGCTATGGACGCGATCGGCGTGTCGCACACGGATCCGCTCGATGACTATGAGCTGATTCACCGCATAGGCAGCGGGACATACGGAGATGTGTTTAAGGCCCGTAGCATTAAGACTTCAGTCATCGCAGCTATTAAAGTGGTCAAACTGGACCCTGGTGATGATATTTCAAGCATTCAACATGAGATAACCATGATGAAGGATTGCACTCACAAAAATATTGTCGCCTATTTCGGCAGCTACCTCAGAAATAACAAGTTATGGATCTGCATGGAATTCTGTGGAGGAGGATCATTGCAGGACATTTACCATGTCACTGGTCCTCTGAAAGAGAGACAGATAGCTTATGTGAGCAGAGAGACACTTCAGGGTGCCAACATTCTTTTGACAGAGCGAGGAGATGTCAAACTAGCGGATTTTGGAGTGGCAGCTGAGATCAACGCATCTGTTGCTAAGAGAAAGTCCTTCATCGGGACACCATACTGGATGGCCCCAGAGGTTGCGGCAGTGGAAAGGAAAGGTGGTTATAACCAGCTGTGTGATATCTGGGCAGTGGGAATCACAGCTATTGAACTAGCAGAGCTGCAACCACCTATGTTTGACCTACACCCTATGAGTTTGCGAATCAGTGAAAGCAAGTTCATTTGCAATATTAGGTCCACCGAATTTCACAATTTCATCAAAATGGCACTCACGAAGAACCCTCGGAAAAGGCCGACGGCAGAAAAACTCCTACAGCATGCTTTTGTCACGCAGCTCCTCACACGTAACCTGGTTATAGAGCTGCTGGACACAGTCAATAACCCTGATCTTCAACAGACACAAACTATGGATGAGAGCGACCTGGAGACTTGCAGTGTCCTACCTGATAAGATTCATTCTCTAGCCAAACTTCCTGTTCAGAGAACTCTGTCTGAGGAGCAATTTGATCATGTGAAGTTTGGGCCACCCATGAGAAAGGAGACGGATCCCTGTCCTGATCTGGGGGCGTGCGATGACTGGAGCTCTATCAACTCGGACAAGGACTCACCGAGTTTGTTAGAATGTGTGGAAGAGGCCTTGATGGAAAGGAGTTTGACTATAAAGAGGGGTTCTTCTTTAGCTGAGCACTCAATGGATGAAGAGGATAAATATGGGACTGTGAAGAGAGCGGTCTCTTCTCCACAATCCACAACCCACTGCCCTTCCAATCAAGAGAAAATGGCGCCCACTCCCTGTTCCCTCTCCTCACCTCTTATTGGCTCCACCCCTCTGAAGGACCCTGCCCCTGACACTAACCCTGCCATTCTCAGTGAATCAGCTTTGCTGATTGGTTCAACGCTGTCTGACCTGTCACTCCTCACAAACTCCTCCCTCTTCACAGACTCCTCCTTCCTCAGTCATTCCACCAGTCTGGGTTCCCTCTGTTCAACACCAACTGAAGGTTTGATACCAGGGAGCTCTGTCGCTCCAGACCCAGGAGGACGCAGGAATAATTTCCCCCCATCTGACCCCCCTCTCTCCCCGGAATGGAGCACTCTCAGGAGGAAACCAGACGACTCAATGGGGGCCTGCTTCTCCAAAGTATTCAACGGCTGTCCATTAAAGACTCACTGTGCTGTTACATGGGTTCTGCCAAAGACCAGAGATCAATACCTTGTGATGGGTGCAGAGGAGGGCATCTACACCCTCAACCTCAATGAGCTCCATGAGGACACTATGGAGAAGTTGCTTCCTCAGAGATGCAGTTGGTTGTACGTGATGAACAACGTTCTTATGTCCGTCTCAGGAAAGTCATCACAGTTGACTTCTCATAGTCTGCCGACACTTTTTGAGTACCGCAGAAATATGCAGCGTAGACAGGGACATCTCGCCATTAACGCACACCGCTTGAGCACAAAGATAAACGCAAGGAAGTACGCCATGTCAGTAAAGATCCCAGACACCAAGGGCTGTAGAAGATGCAGTGTGGTACGAAACCCCTACACTGACAGCGTCTTTCTGTGTGCCGCTGTGCCATCTGGTTTAGTTCTTTTAATGTGGTATGATCCTCTGCAAAAGTTCATGCAGCTCAAGCACATTGCGCTCAGTCTGCCAGAGTCTCTGCCCATCTTTGAGCTCCTCGTACAGGAAACAGAGGAGCTGCCACAGGTCTGTGTGGGGGTGAGAAGCCGCCCCCGCATAAGTGACACCACTGGACAGATGTATTTTGACATAATCCACCTGGATGACACCCCACAAAGTCTGCCAGATGGTGAGTCTTTGGAGGTCAAGCAAGTGATTCAACTCGACAGGGACACAGTTCTCATCGCACTGGAAAAGCATTCTGTTTCAGACACAGTGAAGGTTGTGAATCTGCAGGCATGTCCGAGCCAACAGAAGACCTCTGAACTTTCTTTTGAGTTTTCCATTCAGACGCTGGGACCAGACATTGGGATTGGAGCTGACTTGGAGGCACGAGGTTCAACCATGAGAGAAAGTGACCTGTAGACCTAAATTAGATCTACACTAGGTTTGAAATAACTGTTATGGGTCACTGACTAAATGAATGAGATGCTCTATTTAATGTTAGACAGTCTGGTCGTATTCCTTGTTTTGAGAAATCTATATCATTGACATGTTTTGGTGCTGTGGTTCAGAATTATCTTTCACTGGCCTGTAAATCAGTTGATAGAATTTTGTAAACCATTAAAGTACTGAAAAATCCACCAGAACCCAAAATTGTGAAATACATTAA

Function

symbol description
map4k6 Predicted to enable MAP kinase kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP4K2 (mitogen-activated protein kinase kinase kinase kinase 2).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_04442810_04474877.mRNA True 3723 mRNA 0.44 27 4441797 4475124

Neighbor

gene id symbol gene type direction distance location
CI01000040_04369595_04374831 NA coding upstream 66442 4368465 ~ 4375355 (+)
CI01000040_04063098_04068134 PPP2R2B coding upstream 373599 4062947 ~ 4068198 (+)
CI01000040_04047210_04060876 NA coding upstream 380122 4047210 ~ 4061675 (+)
CI01000040_03939728_03943493 RNF121 coding upstream 498173 3938308 ~ 3943624 (+)
CI01000040_03789687_03800746 STC2B coding upstream 641051 3789081 ~ 3800746 (+)
CI01000040_04475476_04499896 NA coding downstream 188 4475312 ~ 4500113 (+)
CI01000040_04503393_04506409 HMGB3B coding downstream 26599 4501723 ~ 4506409 (+)
CI01000040_04539382_04571810 TRPC5 coding downstream 63826 4538950 ~ 4571966 (+)
CI01000040_04868857_04925336 NA coding downstream 393733 4868857 ~ 4925832 (+)
CI01000040_04931322_04935827 NA coding downstream 456068 4931192 ~ 4935897 (+)
G186128 NA non-coding upstream 31591 4409919 ~ 4410206 (+)
G186040 NA non-coding upstream 184507 4254987 ~ 4257290 (+)
G186064 NA non-coding upstream 189466 4252042 ~ 4252331 (+)
G186057 NA non-coding upstream 201518 4240066 ~ 4240279 (+)
G186041 NA non-coding upstream 215307 4214116 ~ 4226490 (+)
G186026 NA non-coding downstream 98687 4573811 ~ 4577465 (+)
G186601 NA non-coding downstream 192538 4667662 ~ 4670591 (+)
G186632 NA non-coding downstream 216236 4691360 ~ 4692423 (+)
G186695 NA non-coding downstream 446457 4921581 ~ 4946062 (+)
G186741 NA non-coding downstream 501275 4976399 ~ 4976882 (+)
G185947 NA other upstream 467674 3973765 ~ 3974123 (+)
G185884 NA other upstream 702516 3738987 ~ 3739281 (+)
G185296 NA other upstream 1107814 3333578 ~ 3333983 (+)
G184003 NA other upstream 3205308 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 3463634 977184 ~ 978163 (+)
G187510 NA other downstream 1493921 5969045 ~ 5971732 (+)
G188149 NA other downstream 2333567 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 2363000 6832987 ~ 6849135 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019058 map4k6 coding NC_007132.7 CM002905.2 34033580 ~ 34075107 (+)