G186741


Basic Information

Item Value
gene id G186741
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 4976399 ~ 4976882 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU212084
GACCGGTTGCCCATTGAAGCTAAGTAGGGCTGAGCCTAGGGTTGCAAAATTCCGGGAATTAATGGGAATAAACAGGGAATTTGCAAAATTGCAGGTTAGCCTATAACAGGGTACTTAAATGTAGTTTGGAAAAAAAAAAGAAAAAAAAACCCCATCTTGCAGCATAATTTTGGTTAAAACAACCAGATTTAATGCAATTTCAGTTGAATTTTTACCCTGACATTCACACAGCACACTACTTCAGGGCTATTGAGGCCACACCCCCTGCATGCACTGTGCATTCCCCCAGTCCATAACATACACATTTGATCAAAAATACAGAAAAAAACAGTAATATTGTGAAATAACCACAATTTAAAATAATGGTTTTCTATTTTAATATACATTAAAATATAATTTATTTCTGTGATGCAAAGCTGAATTTTCAGATTCATTACTCCAGTCTTCAGTGTCACACGATCCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212084 True 464 lncRNA 0.36 2 4976399 4976882

Neighbor

gene id symbol gene type direction distance location
CI01000040_04956324_04970782 CDC23.L, CDC23 coding upstream 5485 4956145 ~ 4970914 (+)
CI01000040_04938039_04944194 WDR55 coding upstream 32008 4935989 ~ 4944391 (+)
CI01000040_04931322_04935827 NA coding upstream 40502 4931192 ~ 4935897 (+)
CI01000040_04868857_04925336 NA coding upstream 50567 4868857 ~ 4925832 (+)
CI01000040_04539382_04571810 TRPC5 coding upstream 404433 4538950 ~ 4571966 (+)
CI01000040_05011735_05014939 NA coding downstream 34853 5011735 ~ 5015325 (+)
CI01000040_05033284_05043565 NA coding downstream 56317 5033199 ~ 5043565 (+)
CI01000040_05047319_05069572 NA coding downstream 70289 5047171 ~ 5069685 (+)
CI01000040_05088429_05089430 NA coding downstream 109367 5086249 ~ 5090404 (+)
CI01000040_05104703_05110165 KDELC2 coding downstream 127682 5104564 ~ 5111098 (+)
G186695 NA non-coding upstream 30337 4921581 ~ 4946062 (+)
G186632 NA non-coding upstream 283976 4691360 ~ 4692423 (+)
G186601 NA non-coding upstream 305808 4667662 ~ 4670591 (+)
G186026 NA non-coding upstream 398934 4573811 ~ 4577465 (+)
G186128 NA non-coding upstream 566193 4409919 ~ 4410206 (+)
G186689 NA non-coding downstream 1744 4978626 ~ 4996279 (+)
G186696 NA non-coding downstream 38766 5015648 ~ 5016015 (+)
G186760 NA non-coding downstream 68168 5045050 ~ 5045585 (+)
G186762 NA non-coding downstream 93332 5070214 ~ 5070416 (+)
G186769 NA non-coding downstream 97968 5074850 ~ 5075049 (+)
G185947 NA other upstream 1002276 3973765 ~ 3974123 (+)
G185884 NA other upstream 1237118 3738987 ~ 3739281 (+)
G185296 NA other upstream 1642416 3333578 ~ 3333983 (+)
G184003 NA other upstream 3739910 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 3998236 977184 ~ 978163 (+)
G187510 NA other downstream 992163 5969045 ~ 5971732 (+)
G188149 NA other downstream 1831809 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 1861242 6832987 ~ 6849135 (+)

Expression


Co-expression Network