G197400


Basic Information

Item Value
gene id G197400
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6122568 ~ 6123192 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU224102
ATATAATTTTTGATTTCACTCGAAATGTGTGTGTGGTAAACCTTACATTGAGAGGAAAAATAGTCCCCATAAGGATGGTAATACCAGAAATCTTTGATCTTGTGGGAACATTTTTTGGTCCCCATGAAGAAAAAAGCTTATAAATCATACTAAAATGATGTTTTTGAAAATGTAAAAATGCAGGAAGTGTTCTGTGATGGATAGGTTTAGGTTTAGCTTATTCAATATTTATTTTATTGTATTCATTATTATACTGATCTCCAGCATTTCGTTCTGTTGTCATTTTGTTTTATATTTTTCTTTTCACATACTGTAGCAAAACGGCTTCCTGCATGTTAGTTATACCACAATGATAATATTTAAAACAATAATAATAATTAAAGCACCACAGAGGCAGAATGAGGAGCTAAAAATAAAGGCAGCAAACATCAGACCAACTGCGAAAATGAGTAAAGACATTTGGAGACGATTTTAGGCAAAATGGTTGAAAGTCCATAAATACAATCACTTGTAATGTGACATAATTGCTTATTACTTTAGACCAATAGGTGGCGCTGACACCAAATTGATATGGTGTGGTCAGTGTGGGGTGAAAATTAGTTTAAAGAAACACTCCACTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224102 True 625 lncRNA 0.32 1 6122568 6123192

Neighbor

gene id symbol gene type direction distance location
CI01000046_06077232_06091190 RBBP6 coding upstream 30968 6077232 ~ 6091600 (+)
CI01000046_06042369_06053825 CACNG3B, CACNG3 coding upstream 68054 6042276 ~ 6054514 (+)
CI01000046_06028164_06033411 NA coding upstream 88859 6027956 ~ 6033709 (+)
CI01000046_05976907_05986013 PRKCB coding upstream 135394 5976338 ~ 5987174 (+)
CI01000046_05904400_05973821 PRKCB, PRKCBB coding upstream 148747 5904400 ~ 5973821 (+)
CI01000046_06145016_06162787 TNRC6A coding downstream 21824 6145016 ~ 6162787 (+)
CI01000046_06168140_06169381 RPUSD1 coding downstream 44620 6167812 ~ 6169504 (+)
CI01000046_06179800_06180706 NA coding downstream 56002 6179194 ~ 6180917 (+)
CI01000046_06202182_06214539 TRAF7.S, TRAF7 coding downstream 78990 6202182 ~ 6214560 (+)
CI01000046_06330849_06347081 CRLF3 coding downstream 207657 6330849 ~ 6347379 (+)
G197427 NA non-coding upstream 23074 6099199 ~ 6099494 (+)
G197595 NA non-coding upstream 107348 6015014 ~ 6015220 (+)
G197593 NA non-coding upstream 111114 6011160 ~ 6011454 (+)
G197574 NA non-coding upstream 128874 5993473 ~ 5993694 (+)
G197570 NA non-coding upstream 161993 5958452 ~ 5960575 (+)
G197605 NA non-coding downstream 55205 6178397 ~ 6178613 (+)
G197608 NA non-coding downstream 62803 6185995 ~ 6186205 (+)
G197611 NA non-coding downstream 66718 6189910 ~ 6190158 (+)
G197615 NA non-coding downstream 119481 6242673 ~ 6249986 (+)
G197676 NA non-coding downstream 204767 6327959 ~ 6328302 (+)
G197528 NA other upstream 379884 5726121 ~ 5742684 (+)
G197352 NA other upstream 846115 5259318 ~ 5276453 (+)
G196869 NA other upstream 1700881 4415530 ~ 4421687 (+)
G197121 NA other upstream 1751138 4371011 ~ 4371430 (+)
G197055 NA other upstream 1972788 4149423 ~ 4149780 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 696746 6808507 ~ 6821543 (+)

Expression


Co-expression Network