G197611


Basic Information

Item Value
gene id G197611
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6189910 ~ 6190158 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU224320
GGGGTCGTAGGCTTTTAATGCTAGCAGGCTAATGTTAGCATTTCTCAGATCACCTACTGCACTTTAATTGTTGGTCTATGCATACATGCAGATTGATGTCTCTGGTTGTTGTCACATTCTGCTGTTTTTCAGCGTCTTATGCCATGAGCGTCATGTTTTTTTAAGAAACTGTGTCAGGTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTTTCATTTCTTACTCATCCACATGTCGTTCCACACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU224320 True 249 lncRNA 0.41 1 6189910 6190158

Neighbor

gene id symbol gene type direction distance location
CI01000046_06179800_06180706 NA coding upstream 8993 6179194 ~ 6180917 (+)
CI01000046_06168140_06169381 RPUSD1 coding upstream 20406 6167812 ~ 6169504 (+)
CI01000046_06145016_06162787 TNRC6A coding upstream 27123 6145016 ~ 6162787 (+)
CI01000046_06077232_06091190 RBBP6 coding upstream 98310 6077232 ~ 6091600 (+)
CI01000046_06042369_06053825 CACNG3B, CACNG3 coding upstream 135396 6042276 ~ 6054514 (+)
CI01000046_06202182_06214539 TRAF7.S, TRAF7 coding downstream 12024 6202182 ~ 6214560 (+)
CI01000046_06330849_06347081 CRLF3 coding downstream 140691 6330849 ~ 6347379 (+)
CI01000046_06362326_06364947 NA coding downstream 171632 6361790 ~ 6371457 (+)
CI01000046_06465424_06470835 SCPEP1 coding downstream 275266 6465424 ~ 6470994 (+)
CI01000046_06489840_06506540 TUBG1, TUBG1.L, TUBG2 coding downstream 299462 6489620 ~ 6507607 (+)
G197608 NA non-coding upstream 3705 6185995 ~ 6186205 (+)
G197605 NA non-coding upstream 11297 6178397 ~ 6178613 (+)
G197400 NA non-coding upstream 66718 6122568 ~ 6123192 (+)
G197427 NA non-coding upstream 90416 6099199 ~ 6099494 (+)
G197595 NA non-coding upstream 174690 6015014 ~ 6015220 (+)
G197615 NA non-coding downstream 52515 6242673 ~ 6249986 (+)
G197676 NA non-coding downstream 137801 6327959 ~ 6328302 (+)
G197680 NA non-coding downstream 191003 6381161 ~ 6381468 (+)
G197683 NA non-coding downstream 194079 6384237 ~ 6384558 (+)
G197528 NA other upstream 447226 5726121 ~ 5742684 (+)
G197352 NA other upstream 913457 5259318 ~ 5276453 (+)
G196869 NA other upstream 1768223 4415530 ~ 4421687 (+)
G197121 NA other upstream 1818480 4371011 ~ 4371430 (+)
G197055 NA other upstream 2040130 4149423 ~ 4149780 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 629780 6808507 ~ 6821543 (+)

Expression


Co-expression Network