CI01000046_06362326_06364947


Basic Information

Item Value
gene id CI01000046_06362326_06364947
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6361790 ~ 6371457 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_06362326_06364947.mRNA
ATATAAAAGTGCAAGTTTATTTATAATAAACAAGATATTGATTCTCATGCAAGGAATGGTCTTTCAAAAAACTAAGATTCATAAATGTGTGATTTTATTATTGTGTTACTATAGAGAGCCAAATATTTCATTGAGAATGTTTAACAGAAGAAAGCAAGAATGTAAGAATGTAAACTGGTGACTATCGGTCGGTAATGTTGTATTATGCATGTATCCACAAGATGACGCTAGCGCTCCAAATTAATCTACACAACGGCCATAGTGCGCAGCTAACATAAGCCAAGGCAGTGAATATTCTACAGCTCAAAATTATAAAACTATAAAGGTTCAAATCACACAATGTAACTGCTATTTCTCTGTGGGACACAGTGCATATGTCGGCCATTTTAAATAAATTAATAGGATAGGATTTCTTGCGACACTACGCACATATTTCTCATATAAGACATATCAAGATGACCAAGCAATAAACTTTCTAGCGGTTGTACCCTAAACCAAAGGCTAAGAGACAATAGGTGAGTGTGACACATTCATAAATGCATGTGCTACCTAGAATTCCATTTTGGGGAGGGCCTGAGAACTGCACGAGACGAGTCCGCGCGCGAGATCTCCGCTCGCTGCTGCTGCTGTCGCACATGGCACGCGGGTGTGCGGAATACAGCAATCGGAACCAGAACTGGACCGCACGATCGACAAACTTTTTGAGTGTCAGTACGTGCGATTATGACCGTGGACATAAATCAAACACAGGCTGGGTTGATACAACGCTCAAACAGTGGAAGTCCAGCCGAGCCGTCAGAAGCAAGGGAGCGATACAGCAGCCCCATGTCTATGCTTCCCCAGGGGAGGGAACGGGTGTCCAGCTCTCACCAACACCCAGCCGCTGGATTGAAAGCCGGCTCCGTCCTGTTGAAATGCTTTCTTTGCTTGAGCTTGGCCATGCTTCATTCTATCTTATTATAATGTCACATGGAAATCACACTGACAAACTCAATAAACGATCTGTATCGTCTCATTTTGGTGAGGGGCAGGTAATAGCCAACACAGCGGCAGAGAGAAAAAGTGACTCAGCTCCTAGAGGATGCATGCGTTCGAAGGGTGTAAGCCTGTGGAATCTCGAGCTGCTCTTTGAGATCGCCTGATGTCCCACACGTCTCATTTGCACTTCACTATTATCACAGCATGTTGGAAACGGTGCATTTCCCTTCGCTGAGAGCAGAAGATTATTTGGGCCAGGACGTCCCTGTGCAAAAATTAGCCAAAGAGAAAAGCATGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_06362326_06364947.mRNA False 1279 mRNA 0.44 4 6361790 6365084

Neighbor

gene id symbol gene type direction distance location
CI01000046_06330849_06347081 CRLF3 coding upstream 14411 6330849 ~ 6347379 (+)
CI01000046_06202182_06214539 TRAF7.S, TRAF7 coding upstream 147230 6202182 ~ 6214560 (+)
CI01000046_06179800_06180706 NA coding upstream 180873 6179194 ~ 6180917 (+)
CI01000046_06168140_06169381 RPUSD1 coding upstream 192286 6167812 ~ 6169504 (+)
CI01000046_06145016_06162787 TNRC6A coding upstream 199003 6145016 ~ 6162787 (+)
CI01000046_06465424_06470835 SCPEP1 coding downstream 100340 6465424 ~ 6470994 (+)
CI01000046_06489840_06506540 TUBG1, TUBG1.L, TUBG2 coding downstream 124536 6489620 ~ 6507607 (+)
CI01000046_06553680_06556870 NA coding downstream 187242 6552326 ~ 6557725 (+)
CI01000046_06586111_06594100 CNTNAP1 coding downstream 221027 6586111 ~ 6594182 (+)
CI01000046_06605188_06611590 SLC16A6B coding downstream 240104 6605188 ~ 6611714 (+)
G197676 NA non-coding upstream 33488 6327959 ~ 6328302 (+)
G197615 NA non-coding upstream 111804 6242673 ~ 6249986 (+)
G197611 NA non-coding upstream 171632 6189910 ~ 6190158 (+)
G197608 NA non-coding upstream 175585 6185995 ~ 6186205 (+)
G197605 NA non-coding upstream 183177 6178397 ~ 6178613 (+)
G197680 NA non-coding downstream 16077 6381161 ~ 6381468 (+)
G197683 NA non-coding downstream 19153 6384237 ~ 6384558 (+)
G197684 NA non-coding downstream 19968 6385052 ~ 6419782 (+)
G197702 NA non-coding downstream 62760 6427844 ~ 6429635 (+)
G197717 NA non-coding downstream 103417 6468501 ~ 6468883 (+)
G197528 NA other upstream 619106 5726121 ~ 5742684 (+)
G197352 NA other upstream 1085337 5259318 ~ 5276453 (+)
G196869 NA other upstream 1940103 4415530 ~ 4421687 (+)
G197121 NA other upstream 1990360 4371011 ~ 4371430 (+)
G197055 NA other upstream 2212010 4149423 ~ 4149780 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 454854 6808507 ~ 6821543 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location