CI01000049_07651597_07659164


Basic Information

Item Value
gene id CI01000049_07651597_07659164
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 7651597 ~ 7659164 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_07651597_07659164.mRNA
ATGTCGAATCGCATCGCTTTCCAGACGCAGTTAGCTTCCATTATGGAGGTGCTGGCCAATGCAGCGGTGGCTGAGATATGTAAACTCGTGGACGACGACTACGCGATTATAAACTTACAGATGACTCAATGTCAACGTGAAAACAAAGCGCTGAAGAGAAAACTTCACATACTGGAGCTTAAGATGGCACGAGGGTTTGCAGAGAGGAGGATTAGTTCACTGAATCGCACTAACCGGGTTCAAGTGAACGCTTTGTCAGACAAATACAGGAACCAATCAAACGAAGTCCTGTATGGAGCACAGTTTAACACGGGACTGTGGAGAGGCGGAGGGACAGACTCAACTGCTCAGCAGGCTGGAAATGAAAGTAACAGTATGGTAGGAGAAACAAATACTCCTCCACAGACTGGAGAGGCTGCTTTTGGAGATGTTCAGATGATGAAAGATGATGATCAAGTCTCTAGGATGCAGCAACCGACTTTGGAGGTCAGTGGATCTGACACTGCGCTTAAATCTGAGCCAGAGTTTGAGAGTGTTAAGGGGATATCACAAGAGCCCATAGAATTACTTGCCGAAGCAAAGTTTGATTTGAATGGAAAATCCAGTCCTATGAGGGATTATTTAATGCAAGGGAGTGACAATGCAGATTTGCGGCAGCGATCTTGCGTGTACGTGAACAATGCAAGATTGACCGAGAGCCAATCCACGGCCTCTGTACGGCGTTCAGAGATCATAGAGGTCGACTCTGCGGAGGAGGGGGAAGAGATTTCTGTGTGGGCTAGCAAAGTAACACAAGGGAAAAGCCAGGCTCCACGTGTTTATCCACAATACGGGAGGGAGGAACATCAGAATAGCATGGTCCTCTTGCCTTCCTCCAATCCGCCTCTGGTGTCAAGTGGCTTTGCAGCAGTGGCATCGACATCTTCAAAAATACAGGGCACGGACAGCTACCACAATGTCAGTTTTAACCAACAAAGAGTTGGTCGGACTAGAAATGACAGAGTTCCCCAAAAAGTAAAGCGACTTAGTCGAAATGGTTACAAGCAGTTTCTGCAGCAAGGACAGGTGGAAGATGGAGAACCTGAAACAATAGTGATAAAGGAGGATCTAAATGACCAGTGGGAAAGAAACCAGACACAAGCCATAGTTGTGCAGGATGAGTCAAATACAGACTGTAGTGGGAGACTTTCTACCTCACCAGCCAAAAGCACAGTTGCTCTTGGAACAGAAAAGCCTATAGAGGTGGAAGTTTTGAATGATGATAGGAGCCAGAAAACTGACATTTCTCCATCTACTGGACTGCAGATACACATACAGGGTACTGTGGAGTCCAGCCCAAGTAGTTCTCAACAGCACAGGTACCACAAGTTTGTTGTTCAACCTAGCAAGGGTCTAACAACAGGAGAAACGGCAGCTCTCACAGGTTCAGGGCACATACACAAGGGAATGGTGAAAAGCAGAACTTCACCCAAGAACCATGACAAGACAGCCACTGAAACATCAGGAAAAGGCTGCTTGTTGTATGAGAGACCTGCAGAGCATAAGACCAGCTTTGCACACTGGCCCACACATCCATCCTGCTCATATACAGAGTCGGACCAGGATCAAGACTGTATGCTGGTTCAGTCAGACACCGTATCATCTGTTAGAAGCTCCAAAGGTGGACGGGATGGAGTGCCATCTACCCAAAAACATGCTGTTAGAAATGCAGGTGCAACAGAGGGACCTATGAGAGAAGAGGAAAGGTGGAATCAAGCTGCCATTTTGAGACAAAGCCAAACTGAAACATCAGGCCACATCAGTAGGCCCGAAACTATTCAAACAGAAACTGCAAGTAGAACAAACCCCTCGTATTTCACTGTGATTCCCCAAATGGTGTCCAACTTAAATCAACCTGGGGCTTCTTTTGCTGGGCTGCAACTACCAAAGCACATGGACAAAGCTAGGCGGAAAAGTTACGTTTCTGGATATCCAAATCAGCCCGAACCATCTTTACTGAGCGAATGGCGTTCTCGGGCTTCATCTTTGTCAGAGTTCCTCGGCAAATCACGCGTCGGCTCTCCATTTTTGCTGTGCGAATGGCGTTTTCTGGCTTCGCGCGTCGGATATTCATCTTGCAGTCACCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_07651597_07659164.mRNA True 2128 mRNA 0.47 9 7651597 7659164

Neighbor

gene id symbol gene type direction distance location
CI01000049_07643462_07649170 NA coding upstream 2290 7641794 ~ 7649307 (+)
CI01000049_07635510_07639493 PAI2B, PAIP2B coding upstream 11479 7635510 ~ 7640259 (+)
CI01000049_07625650_07632416 NA coding upstream 19154 7625650 ~ 7632443 (+)
CI01000049_07441504_07445621 LRPAP1 coding upstream 205976 7441357 ~ 7445621 (+)
CI01000049_07321372_07321961 NA coding upstream 328653 7321313 ~ 7322944 (+)
CI01000049_07690452_07701127 NA coding downstream 31227 7690391 ~ 7701751 (+)
CI01000049_07705032_07706755 NA coding downstream 45805 7704969 ~ 7706871 (+)
CI01000049_07707556_07709034 NA coding downstream 48392 7707556 ~ 7709301 (+)
CI01000049_07735779_07751747 TCIRG1A coding downstream 76615 7735779 ~ 7751747 (+)
CI01000049_07788293_07793674 NA coding downstream 129129 7788293 ~ 7793695 (+)
G210065 NA non-coding upstream 58796 7592023 ~ 7592801 (+)
G210061 NA non-coding upstream 74085 7575782 ~ 7577512 (+)
G210057 NA non-coding upstream 81233 7567660 ~ 7570364 (+)
G210019 NA non-coding upstream 91545 7558924 ~ 7560052 (+)
G210076 NA non-coding downstream 61202 7720366 ~ 7721230 (+)
G210077 NA non-coding downstream 62291 7721455 ~ 7722273 (+)
G210142 NA non-coding downstream 155103 7814267 ~ 7814528 (+)
G210151 NA non-coding downstream 167114 7826278 ~ 7826535 (+)
CI01000049_07219171_07224229 NA other upstream 354535 7218811 ~ 7224268 (+)
G209660 NA other upstream 769567 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 3175327 4473662 ~ 4476270 (+)
G208074 NA other upstream 3769386 3877396 ~ 3882211 (+)
G207888 NA other upstream 4027286 3624002 ~ 3624311 (+)
G210091 NA other downstream 214586 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 668788 8326285 ~ 8329915 (+)

Expression


Co-expression Network