CI01000049_07788293_07793674


Basic Information

Item Value
gene id CI01000049_07788293_07793674
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 7788293 ~ 7793695 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_07788293_07793674.mRNA
TGAACACGTCACATAATATAACAGAATCAGAGGAGAATTACTGGTCCAGAATTGAGAAGTCTATTCTCGCTCCCATCCTCACCACTGAGATGGTACTGGGTGTTTTGGGAAATGGACTGGTTTTGATAGTTAAATTAGTGTGTAAAGACCATTTTCAGTGTCTTTACTGGCTGCCACTTTTCAGTCTCACGCTCTCAGATTTCTTCTGCTCCATCCTCATAATCTGTGGCTCCCTCTTAGCTGTGCTGAGTGACGGTCAGATTTCACCGTGGTGTGAGGTGGTGAGCCTGCTAAAGTTCACCTTCATCACCTCTTCCATTGGAAGCATAGGTATGGCTGACATTGAGTTAATTATACCTCTATTGGATTTCTTTACAAATACTGCTTTCATTGTCATTAGCAATAAAGGACAATACATAAACACCCCTTTGTACATCCGAACGGGTTCAGACAGATTTATGGGCATTCCTTCCAAAGGCAAAAGACTGTCTGTTGTCATGGCAGTTGCATGTGTGGCATCATGGTGCACTGGAGCTATATTTGGAGCAGTGCCAGTAGCCTATGAGTGGATAAGATATGATCCAGCTGAAATGCTGTGTGCAGTGTTCTGGGAGAGCAGTTACTCTGACATGCTGGTTTACATCCTCTGTGCCTTCTCCACCTCCATCTTCGTCCCATTCCTCCTAATACTCTGCTGCTCCATCCTGACTTGTGTAGGCTTTGGGAAACAATGTTCTAGCCAGGATGACCTGTCCTCTATCACGCCACTGCTGGTGATCTTTTATCTGTTCTGCTATGCTCCATTTGCTGCATCTGAGTTGGTTCTCCTTGGACGGCTTGATCTGTCCCCGTCCCCTGAGTGGCTGAGATCACTATCATCAGTAATGGCGTATCTGGACTGTTGTTTAAACCCATTCATCTACTGCACAAATAAAGACTTCCGAGAAGCAGTTCTCATACTTGTGTGGAACAAAAGGAGATCAATTACTCCAGAGCCAGTGCTGACTGGCATTACAAGGCTTGAATTATGAAGATTTACATGCATGAAGATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_07788293_07793674.mRNA True 1052 mRNA 0.45 6 7788293 7793695

Neighbor

gene id symbol gene type direction distance location
CI01000049_07735779_07751747 TCIRG1A coding upstream 36546 7735779 ~ 7751747 (+)
CI01000049_07707556_07709034 NA coding upstream 78992 7707556 ~ 7709301 (+)
CI01000049_07705032_07706755 NA coding upstream 81422 7704969 ~ 7706871 (+)
CI01000049_07690452_07701127 NA coding upstream 86542 7690391 ~ 7701751 (+)
CI01000049_07651597_07659164 NA coding upstream 129129 7651597 ~ 7659164 (+)
CI01000049_07799740_07805784 NA coding downstream 6045 7799740 ~ 7805784 (+)
CI01000049_07855958_07856965 NA coding downstream 61631 7855326 ~ 7857896 (+)
CI01000049_07881589_07906998 NA coding downstream 87894 7881589 ~ 7907901 (+)
CI01000049_07919606_07935459 SLC43A1B coding downstream 125911 7919606 ~ 7935585 (+)
CI01000049_07940922_07947928 TMX2B, TMX2 coding downstream 147227 7940922 ~ 7948246 (+)
G210077 NA non-coding upstream 66020 7721455 ~ 7722273 (+)
G210076 NA non-coding upstream 67063 7720366 ~ 7721230 (+)
CI01000049_07635510_07639493 PAI2B, PAIP2B non-coding upstream 148034 7635510 ~ 7640259 (+)
G210065 NA non-coding upstream 195492 7592023 ~ 7592801 (+)
G210142 NA non-coding downstream 20572 7814267 ~ 7814528 (+)
G210151 NA non-coding downstream 32583 7826278 ~ 7826535 (+)
G210162 NA non-coding downstream 55199 7848894 ~ 7849183 (+)
G210163 NA non-coding downstream 55506 7849201 ~ 7849497 (+)
G210164 NA non-coding downstream 55817 7849512 ~ 7850134 (+)
CI01000049_07219171_07224229 NA other upstream 491231 7218811 ~ 7224268 (+)
G209660 NA other upstream 906263 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 3312023 4473662 ~ 4476270 (+)
G208074 NA other upstream 3906082 3877396 ~ 3882211 (+)
G207888 NA other upstream 4163982 3624002 ~ 3624311 (+)
G210091 NA other downstream 80055 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 534257 8326285 ~ 8329915 (+)

Expression


Co-expression Network