G210077


Basic Information

Item Value
gene id G210077
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 7721455 ~ 7722273 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU238318
TTCAAAACTCTTCACACAGTTCTCCTAACCAACTTTCATCTTGGCACAGAGGTTAACTTCACATTCAAAATGCACCAAATCTACCAAAACACTTCATGCATGTCTCAAATCAACTCATTCTTCCAGAACACTAGCAAAGGTTTTCACTGAGCAAACACACTTTGTCACTCGTAAAACATCGACCTAAAAACACTAACATCAGTTAGCATTATACAATGTTTTCTTTTTTTAAATTTCTTTACAAAACAAGAATGACACTCTCTATTGCTTATAATTCACTGCAGTTTATGTTACATGGTCCATGTTTACATTACAGAACAAAATTATTCCTAAGTTTCCCCTTTTGAATTGATGGTAATGAAATTGAAAGACTAATGCTTGTGTAGGTGTTCAGTTTCATCTAATTGTTTTGATAGTATTTGATTTTTTAGATTCAGAATATATTTCATAACTATATTACTGTAGAAATGTAGCAAATTTCTGTCTTATTCAGTTTTGTATTATGTTATTATTTCGAACTTAAGTTTAACAGTTTTGAAAACAGTATGTAAACGTGCAAATTGGCATGTACGTACAAAGAGTTTTGGCAGTTGTTGTGTCTGAGTGAGAAAAGAATTCATGAAATTTGAGAGATGTAGTCATTGAATGCATTTTGTGCCAAAGCAATGATAATTGATCCTCAGTTTAGCCCACATAGACTTCTGTTGTGCTCACTGTGTGAAGAGTTTTGCAAAAGTGACCTAAGTATTGAGAAATGTGTCCTAGCGTCTATAAAAAACTGTAATGGTTAATCAATGAATCATTTGGTACATCTATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238318 True 819 lncRNA 0.32 1 7721455 7722273

Neighbor

gene id symbol gene type direction distance location
CI01000049_07707556_07709034 NA coding upstream 12154 7707556 ~ 7709301 (+)
CI01000049_07705032_07706755 NA coding upstream 14584 7704969 ~ 7706871 (+)
CI01000049_07690452_07701127 NA coding upstream 19704 7690391 ~ 7701751 (+)
CI01000049_07651597_07659164 NA coding upstream 62291 7651597 ~ 7659164 (+)
CI01000049_07643462_07649170 NA coding upstream 72148 7641794 ~ 7649307 (+)
CI01000049_07735779_07751747 TCIRG1A coding downstream 13506 7735779 ~ 7751747 (+)
CI01000049_07788293_07793674 NA coding downstream 66020 7788293 ~ 7793695 (+)
CI01000049_07799740_07805784 NA coding downstream 77467 7799740 ~ 7805784 (+)
CI01000049_07855958_07856965 NA coding downstream 133053 7855326 ~ 7857896 (+)
CI01000049_07881589_07906998 NA coding downstream 159316 7881589 ~ 7907901 (+)
G210076 NA non-coding upstream 225 7720366 ~ 7721230 (+)
CI01000049_07635510_07639493 PAI2B, PAIP2B non-coding upstream 81196 7635510 ~ 7640259 (+)
G210065 NA non-coding upstream 128654 7592023 ~ 7592801 (+)
G210061 NA non-coding upstream 143943 7575782 ~ 7577512 (+)
G210142 NA non-coding downstream 91994 7814267 ~ 7814528 (+)
G210151 NA non-coding downstream 104005 7826278 ~ 7826535 (+)
G210162 NA non-coding downstream 126621 7848894 ~ 7849183 (+)
G210163 NA non-coding downstream 126928 7849201 ~ 7849497 (+)
G210164 NA non-coding downstream 127239 7849512 ~ 7850134 (+)
CI01000049_07219171_07224229 NA other upstream 424393 7218811 ~ 7224268 (+)
G209660 NA other upstream 839425 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 3245185 4473662 ~ 4476270 (+)
G208074 NA other upstream 3839244 3877396 ~ 3882211 (+)
G207888 NA other upstream 4097144 3624002 ~ 3624311 (+)
G210091 NA other downstream 151477 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 605679 8326285 ~ 8329915 (+)

Expression


Co-expression Network