CI01000049_07705032_07706755


Basic Information

Item Value
gene id CI01000049_07705032_07706755
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 7704969 ~ 7706871 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_07705032_07706755.mRNA
CAATATATAGAATTCAAACCTATTTCGTACTCATTGATTTATTTATTTTTAAAACCTCTTAAGATGGATTCCAGTTGTGAAACCTATGACGAATTCACACCCCTTCATACAGCGTGTGAGTTGGGGAACTTGGAAATGATTGAGTTCCTGCTGTCAAAAGGGGCGTCTCCTCATCACAAGAACCGCTTTGGACATTGCCCAATGTACATGGCCATTAAGAACAGGCATTGTCAAGCTGTCAAACTCCTGAGCATGAAAGGAGTTACTGTTAGACTACACCCTGTGAGAATTGCCATGGAAATGATCCAAGTGGTACAGAACAGAGATTACCCTCTGCTGTATGCTTGGGTTGTATCAGGAGTTGATATGGACACTAAAGACTATAATGGACGCACTGTAATGCATGAGGCAGTTGATCTGGGAGATAAATTGATGATTGCCAGACTACTGGAATATGGAGCCACACCACTGGAGAGAGATGTGTGGGGTCAGACAGCTATGGATAATGCTCAAAATGACACAATGATCATGGCTCTTTTTGAGCCTCTTTTCACAGTGCATTGCCCCACCAAACAGGCCTATCTGCTGTATAAGGCAAAACATTCACACTAATAGAAAAAAAAAAAGTTTTTTTTTTTGTCAGAAACCTTTTTAATTTTTCTTTTTTTTTGTGTGTGTGAATTTGTATTTTTCTCTCACTCTGCTATTGTATTTGTAGGAGGACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_07705032_07706755.mRNA True 728 mRNA 0.40 4 7704969 7706871

Neighbor

gene id symbol gene type direction distance location
CI01000049_07690452_07701127 NA coding upstream 3218 7690391 ~ 7701751 (+)
CI01000049_07651597_07659164 NA coding upstream 45805 7651597 ~ 7659164 (+)
CI01000049_07643462_07649170 NA coding upstream 55662 7641794 ~ 7649307 (+)
CI01000049_07635510_07639493 PAI2B, PAIP2B coding upstream 64851 7635510 ~ 7640259 (+)
CI01000049_07625650_07632416 NA coding upstream 72526 7625650 ~ 7632443 (+)
CI01000049_07707556_07709034 NA coding downstream 685 7707556 ~ 7709301 (+)
CI01000049_07735779_07751747 TCIRG1A coding downstream 28908 7735779 ~ 7751747 (+)
CI01000049_07788293_07793674 NA coding downstream 81422 7788293 ~ 7793695 (+)
CI01000049_07799740_07805784 NA coding downstream 92869 7799740 ~ 7805784 (+)
CI01000049_07855958_07856965 NA coding downstream 148455 7855326 ~ 7857896 (+)
G210065 NA non-coding upstream 112168 7592023 ~ 7592801 (+)
G210061 NA non-coding upstream 127457 7575782 ~ 7577512 (+)
G210057 NA non-coding upstream 134605 7567660 ~ 7570364 (+)
G210076 NA non-coding downstream 13495 7720366 ~ 7721230 (+)
G210077 NA non-coding downstream 14584 7721455 ~ 7722273 (+)
G210142 NA non-coding downstream 107396 7814267 ~ 7814528 (+)
G210151 NA non-coding downstream 119407 7826278 ~ 7826535 (+)
G210162 NA non-coding downstream 142023 7848894 ~ 7849183 (+)
CI01000049_07219171_07224229 NA other upstream 407907 7218811 ~ 7224268 (+)
G209660 NA other upstream 822939 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 3228699 4473662 ~ 4476270 (+)
G208074 NA other upstream 3822758 3877396 ~ 3882211 (+)
G207888 NA other upstream 4080658 3624002 ~ 3624311 (+)
G210091 NA other downstream 166879 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 621081 8326285 ~ 8329915 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_001449 si:dkey-9i23.14 coding NC_007112.7 CM002885.2 44930457 ~ 44933094 (-)