CI01000049_07799740_07805784


Basic Information

Item Value
gene id CI01000049_07799740_07805784
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 7799740 ~ 7805784 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000049_07799740_07805784.mRNA
ATGCAGAGCGATGTGAGGGATGGTCAACAGAATGACATCCCACTACTGCAGTCTATGCTGCTGAAACTTATGAGTCCAAAAAAACGTGTCGACCATCCAAAAAGAAGTACTTCCAAATCACATGCGCATCCAGATACAACTTCTCAAAGCATGTTTTACCAATCTCTGGAGTCTGAAGATATAGCAAATGAAGACAGGAACGATTTGGATAGCACAGTCAGATCTGAGGATGATGAGAAACAACCAACAAGTAGCTCTGAAACAGAAGATGGAAATGAAATGGTTGAAGAGAGAAAGAGCCCTCTCCCTATACAAACACAGGCAGAAGAATCAAGTCAGGAGCCAAAAGAAAGTGAATTGCTGGTGGACAAAAATAATAAAGAGCCTAGCATGGAGGAGCACATGGCTGGAGCCGCATCATTGCTTAACAATCCGCCTCAAGAATCATCTGCACACACGTCTCACCTCTCGATGTCCTCAGATAGATGTGACACTGCACAGATGGAGTTTAAGCATGAACAACTAGATGAGGCTTGTGGTGGTCCCTTAAAACCAGTCGGTATGGACACAAGCAGTGTTCTGACCCATCAAACTGTTGTGAGCATTACAAGCAGGACAGCAAGATCTGCTTCAGATCCAGTAGCCCAGAAGCCTAAGGAAGAGAGACCCCTCTCAGCTCCAAGTATTTCAGACCTACGGGAATATGAAAACATTGCAAATACAATGAAAAGGTTCAGCAAAGCTGCTGTGGTTTTGGGATGGGAGGATTCAGACATGAGTTTCGGGGGTATGGAACAGGAGAACTCGCATGCCAAAACACAAAAGAAGGGCGTGAAAAACAAGATGAAGAATCTTACTCATAAACTGATGGAAAAGTTGAAAGAAAAACGTGATTGTGAGCAGGCTGACAGCAAGAGCATCCAAGACAGTGGGGAAGAAGAGGCACAATGTATAGAGGTCGAGGCTGCAGAGGCTCCTCCACCACTTCCACCAAAAAAGGGGAAATATGTTTTCTTAGACAGAAAATTTACCTTAAAAGACTTCAAACTCGATCTTGAACCGATCAACTTAATGGAGGAAATATTCACAGGAAACGAATGGCTCAGTTACCTGCCCAGCAAAACCAGTCCAGCAGAGAAAGACACTAGTGATCAACCAATGACAAATGATGTTGTCCAAACAGAAAAAAAAACTCAGCTCACTATTCCGCTTTTGACACCAGAGCAGGACAAATCAGAGGACATAAAGAACAATCAAGAGGATGTTAGTGATGCTCAACAGGACAATGTAGCAGAAGTGAACAGTGACTCACATGTAAGACAAATGAAACAGGATGCAAAAACTTTTGCTATTCCTAAGGCACTGCTAACAAATAATGCAATAAAACAAATGGCATGTGGGATGGACTGCGAGTCAAAGAAATCAGGTGACATCTATGACCATTTGGACATGTATATTATTCCCAAAAATGATTTAAAATTAATGAAAAGAAAGTCGTCGGATGCTCCGCCGATGGACTTTTCAGCAGTCAAGTCATTTGAATTGCTGGACAACTCTGCTCTCAAAAGTCGAATCCGTCTCAGCAAAAAGAGACCCCACAAACCCCGCAAAAAAGTAAAAATAGAAAAGTCAAACGCCAAATTCTACAAAATTCCCGAAGTCATCCCGAATGAATCCCCAGTCAGTGCATCTCTACCATTTAAAAGCATCCCCTTTTCCAAGTCTCCTCCTCTGCATTCACCACTATTTCCAGATCAC

Function

NR:

description
hypothetical protein cypCar_00010728

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000049_07799740_07805784.mRNA True 1758 mRNA 0.43 5 7799740 7805784

Neighbor

gene id symbol gene type direction distance location
CI01000049_07788293_07793674 NA coding upstream 6045 7788293 ~ 7793695 (+)
CI01000049_07735779_07751747 TCIRG1A coding upstream 47993 7735779 ~ 7751747 (+)
CI01000049_07707556_07709034 NA coding upstream 90439 7707556 ~ 7709301 (+)
CI01000049_07705032_07706755 NA coding upstream 92869 7704969 ~ 7706871 (+)
CI01000049_07690452_07701127 NA coding upstream 97989 7690391 ~ 7701751 (+)
CI01000049_07855958_07856965 NA coding downstream 49542 7855326 ~ 7857896 (+)
CI01000049_07881589_07906998 NA coding downstream 75805 7881589 ~ 7907901 (+)
CI01000049_07919606_07935459 SLC43A1B coding downstream 113822 7919606 ~ 7935585 (+)
CI01000049_07940922_07947928 TMX2B, TMX2 coding downstream 135138 7940922 ~ 7948246 (+)
CI01000049_07972199_07972908 NA coding downstream 166259 7972043 ~ 7973140 (+)
G210077 NA non-coding upstream 77467 7721455 ~ 7722273 (+)
G210076 NA non-coding upstream 78510 7720366 ~ 7721230 (+)
CI01000049_07635510_07639493 PAI2B, PAIP2B non-coding upstream 159481 7635510 ~ 7640259 (+)
G210065 NA non-coding upstream 206939 7592023 ~ 7592801 (+)
G210142 NA non-coding downstream 8483 7814267 ~ 7814528 (+)
G210151 NA non-coding downstream 20494 7826278 ~ 7826535 (+)
G210162 NA non-coding downstream 43110 7848894 ~ 7849183 (+)
G210163 NA non-coding downstream 43417 7849201 ~ 7849497 (+)
G210164 NA non-coding downstream 43728 7849512 ~ 7850134 (+)
CI01000049_07219171_07224229 NA other upstream 502678 7218811 ~ 7224268 (+)
G209660 NA other upstream 917710 6878133 ~ 6882030 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other upstream 3323470 4473662 ~ 4476270 (+)
G208074 NA other upstream 3917529 3877396 ~ 3882211 (+)
G207888 NA other upstream 4175429 3624002 ~ 3624311 (+)
G210091 NA other downstream 67966 7873750 ~ 7878856 (+)
CI01000049_08326623_08329601 NA other downstream 522168 8326285 ~ 8329915 (+)

Expression


Co-expression Network