CI01000050_07250416_07306801 (MTOR)


Basic Information

Item Value
gene id CI01000050_07250416_07306801
gene name MTOR
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7250416 ~ 7306801 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07250416_07306801.mRNA
ATGTCTGGCACTGCCACAGTTCTGCAGCAGTTTGTGAGTGGTCTTAAGAGTCGCAATGAAGACACACGTGCCAAAGCTGCCAAAGACCTCCAGCACTATGTCACTACAGAACTAAGAGAGCTGAGCCAAGATGAAGCCACCACTTTCTATGATGAGCTGAACCACCACATATTTGAGTTGGTTTCCAGCTCAGATGTGAATGAGAAAAAAGGTGGTATCCTTGCCATAGTGAGTTTGATCGGTGTGGAGGGGGGAAATGCCACCCGTATCAGCCGATTTGCAAACTACCTACGCAACCTGCTTCCCTCCAGTGACTCAGTGGTCATGGAGATGGCCTCTAAGGCCATGGGTCACCTGTCCATGGCGGGAGACACCTTCACTGCAGAGTATGTGGAGTTTGAGGTGAAGAGAGCTCTCGAATGGCTGGGAGCAGACAGAAATGAAGGAAGACGGCACGCAGCGGTGCTGGTTCTGCGAGAGCTCGCTGTTAGCGCACCTACATTCTTTTTCCAGCAGGTGCAACCGTTCTTTGATAACATTTTCTATGCTGTGTGGGACTCCAAACAGGCCATTCGTGAGGGTGCAGTATCTGCACTCAGAGCCTGTCTGATCCTCACCACCCAGAGAGAGACCAAAGAGATGCAGAAGCCACAGTGGTACAAGCAAACATTTGAGGAAGCCGAGAAGGGTTTTGATGAAACTCTGGCTAAAGAGAAAGGCATGAATAAGGATGACCGTGTTCATGGAGCTCTACTCATTCTCAATGAACTAGTGCGAATAAGCAGTATGGAGGGAGAGCGTATGAGAGAAGAGATGGAGGAGATCACGCAGCAGCAGATGGTTCATGATAAGTACTGTAAGGAGTTGATGGGTTTCAGCACTAAGCCACGGCATATCACACCCTTCACCAGCTTTCAGTCAGTGCAGCCGCAGCAGTCCAATGCTCTGCTGGGGCTGCTGGGATATAGCACACCACAGGGCTTCCTAAGTTTTGGAGCTGCACCTGTTCCCTCTAAAAGCACGCTTGTGGAGAGCCGGTACTGCAGAGAACTGATGGAGGAGCGTTTTGACCAGGTGTGCCGTTGGGTGCTGAAATACAGGACCAGTAAGAATCCACTAATCCAGATGACTATCCTAAACCTTCTGCCTCGACTCGCTGCCTTCCAGCCTCATACTTTCACTGATCAGTATTTACAGGACACTATGGGGCACCTGCTGGGCTGCCTGAAAAAAGAAAAGGAACGGACAGCAGCATTTCAAGCATTGGGTCTGCTGGTAGTGGCTGTAAGGACCGAAATTCAGCCCTACCTCACCAAGATCCTGGAGATTATCAAAGCTGCACTGCCACCTAAAGACTTTGCACACAAGAGGCAGAAGACCATGCAGGTGGATGCTACTGTATTCACTTGTATAAGTATGCTGTCCAGAGCTATGGGGCCTAGCATCCAACAGGATGTCAAAGAACTTCTGGAGCCCATGTTAGCTGTTGGTCTCAGTCCTGCTCTGACTGCAGTGCTGTATGACCTGAGCAGACAGATCCCACAGCTGAAAAAGGACATTCAGGACGGTCTGCTAAAGATGCTTTCACTTGTGCTCATGCATAAGCCACTGCGTCACCCAGGTATGCCCAAGGGCCTGGCATACCAGTTGGCATCACCCAGCCTGACCAACATCCCTGAGGCTAGCGATGTGGGCAGCATCACCCTGGCACTGCGTACTCTCGGCAGCTTTGAATTTGAAGGTCACTCCTTGACACAGTTTGTGCGCCACTGTGCTGACCACTTCCTGAACAGCGAGCACAAGGAGATTCGCATGGAGGCAGCGCGTACCTGCTCACGTCTGCTCACCCCCTCCATTCACCTGATTAGTGGCCACGGACACGTGGTCAGTCAAACCGCTGTGCAAGTGGTGGCTGATGTTCTCAGCAAGTTACTGGTGGTTGGCATCACTGACCCAGACCCTGATATTCGATACTGTGTGCTGGCCTCTCTGGACGAACGCTTCGATGCCCACCTGGCACAAGCAGAGAACCTCCAGGCTCTGTTTGTGGCCCTTAATGATGAAGTGTTTGAGATTCGTGAACTGGCCATCTGCACTATCGGCCGTCTTAGCAGTATGAACCCGGCCTTTGTCATGCCCTTCCTGCGCAAGATGCTCATTCAGATCCTGACCGAGCTGGAACATAGCGGTGTGGGCCGAAACAAAGAGCAAAGTGCCCGCATGTTGGGTCACTTGGTGTCTAATGCCCCTAGACTCATCCGCCCATACATGGAGCCCATTCTCAAGGCCCTCATCTTGAAGCTGAAAGATCCTGATCCAAACCCTGCAGTCGTTATCAGTGTATTAGCTACCATTGGAGAACTTGCCCAGGTGAGTGGACTGGAGATGAGGAAATGGATGGATGAGCTGTTCCCCATCATTATGGACATGCTGCAGGACTCATCTTCATTAGCCAAGCGACAGGTGGCACTTTGGACTTTGGGTCAACAAGTAGCCAGTACTGGGTATGTGGTGGAGCCATACAGGAAGTACCCATCTCTACTAGAGGTGCTACTCAACTTCCTGAAGACAGAACAGAACCAGGGGATTAGGAGAGAGGCTATACGTGTGTTAGGTCTGCTTGGAGCTCTGGATCCCTACAAACACAAGGTGAATATCGGTATGATTGACCAGTCTCGCGATGCTTCGGCTGTCAGCCTCTCAGAGTCCAAGTCCAGCCAGGATTCAGCTGACTACAGTACCAGTGAGATGTTGGTCAACATGGGCAACCTGCCACTTGATGAGTTTTACCCAGCAGTTGCCATAGTGACTTTGATGCGTATCCTACGTGACCCGTCGCTGTCCAATCACCACACCATGGTGGTGCAGGCTGTCACCTTCATTTTCAAATCGCTTGGCCTGAAATGTGTGCAGTTCCTGCCTCAGGTTATGCCCACCTTTCTCAACGTCATCAGAGTGTGTGATGCCAGCATCAGAGAGTTCCTTTTCCAGCAGATGGGGATGGTTGTGTGCTTTGTCAAGATCCACATCCGGCCATACATGGATGATATCTTCACGCTAATCCGGGAATACTGGACTCCAAACAACCCCATGCAGAACACCATTATTTTGTTGATTGAGCAGATTGTGGTGGCACTAGGTGGAGAATTCAAACTCTACCTGCCACAGCTCATCCCACATATGCTGCGAGTCTTCATGCACGACAACAGCACTGGACGTAGTGTCACCATTAAGCTGCTCATGGCCATCCAGCTGTTTGGAGCTAACCTGGATGACTACCTCCACCTACTGCTGCCTCCTGTAGTTAAACTGTTCGATGCCCCTGATGTCCCCCTGCAGGCCCGCAAG

Function

symbol description
mtor Predicted to enable protein serine/threonine kinase activity. Acts upstream of or within several processes, including positive regulation of myelination; regulation of TOR signaling; and skin development. Predicted to be part of TORC1 complex and TORC2 complex. Predicted to be active in nucleus. Is expressed in several structures, including digestive system; male organism; myotome; nervous system; and somite. Human ortholog(s) of this gene implicated in autosomal dominant polycystic kidney disease; kidney angiomyolipoma; lung disease (multiple); prostate cancer; and type 2 diabetes mellitus. Orthologous to human MTOR (mechanistic target of rapamycin kinase).

GO:

id name namespace
GO:0048565 digestive tract development biological_process

KEGG:

id description
K07203 MTOR, FRAP, TOR; serine/threonine-protein kinase mTOR

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07250416_07306801.mRNA True 3348 mRNA 0.51 21 7250416 7306801

Neighbor

gene id symbol gene type direction distance location
CI01000050_07221976_07238268 QARS coding upstream 11957 7221775 ~ 7238459 (+)
CI01000050_07124003_07124284 NA coding upstream 126074 7123887 ~ 7124393 (+)
CI01000050_07107277_07123150 SULT1ST1, SULT1ST2, SULT1ST3 coding upstream 127232 7106594 ~ 7123184 (+)
CI01000050_07078547_07104277 TAS1R2.1 coding upstream 145816 7077133 ~ 7104600 (+)
CI01000050_07008484_07018990 NA coding upstream 230753 7008484 ~ 7019663 (+)
CI01000050_07312365_07324523 NA coding downstream 3780 7310581 ~ 7324673 (+)
G216823 NA non-coding upstream 35112 7208443 ~ 7215304 (+)
G216826 NA non-coding upstream 66491 7178673 ~ 7183925 (+)
G216852 NA non-coding upstream 75244 7174973 ~ 7175172 (+)
G216850 NA non-coding upstream 76741 7173048 ~ 7173675 (+)
G216843 NA non-coding upstream 93522 7155544 ~ 7156894 (+)
G216825 NA non-coding downstream 42405 7349206 ~ 7367142 (+)
G215773 NA other upstream 584713 6661188 ~ 6665703 (+)
G215539 NA other upstream 1619213 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1840768 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 2657367 4589926 ~ 4593049 (+)
G214717 NA other upstream 3142136 4107582 ~ 4108280 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036709 mtor coding NC_007119.7 CM002892.2 46077609 ~ 46321918 (-)
bowfin (Amia calva) AMCG00002256 mtor,LOC107564227,LOC107727986 coding CM030136.1 CM030136.1 9026743 ~ 9049195 (+)