CI01000050_07008484_07018990


Basic Information

Item Value
gene id CI01000050_07008484_07018990
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7008484 ~ 7019663 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07008484_07018990.mRNA
ATGGCTAGGCTTCCCCAGGTGGTGAGCTTTGCCAGCCTGAAATTTGACCGCTCTTACAGCTGGATGGTCCTATGTGTGCTCTGGTGCTCAATAGCACAATCAATCCTCCTTCCCATGTTCTTGTGGGCTTGTGACCGCTACAGGGCAGACGTCAAGATGGTCTGGGAGAAATGTGTGGCCATCATGTCCAACGATGAAGTGGATGAAGAAAACAGCCAGGATGGAGGCATTCATCCGGACTTAATATTTGACAGACCATTTGACTATAGCTCCGCTGGTGATATCATGACGGTAGACCGTATTGCCAAATACGAATTCTCAACCTTAGAAAGGGGGGGCCCCCAGGGTTATCCATTGAGGGAGCTTCAGGAAGATAAAATGCACTATTTGCAGGTGCCCCCTACAAGAAGATACTCCCACGACGAAACCGACATGTGGACCACCGGTCAGATCCCGTCTTACCTACATCGCTGGGGCTCCACAGAGGACATCATTGGCATCCCGCAATGCAGCTTGCCACGCCACGAGAGACGTCGGAGCAGCCCGGCACCCTACCACGAGGAGAGCCACCCTCACCGCAAAAGGAGGCGATCAGAGGACATGCATTCACTCAAGCAGATTCCACGAGTCGAGCGTTATGAGGACGATTTCAAGTGCTTTAGCCGCGACGAAGTGATTAAGTTCATCGACGAGACACCTCTGGCTAGTCCAATGAGGAGCCCGCGCCGAGCCTCTGCGATCTCTCTTGTCCCAGAGACGTTCGAGCAGCACATCGTCTTGTTGCCGCATTTCCCGCTCACACACTTTGAGCGCGAGCCTCAAGCGTTGAGACGCTGCTCCGACCATGGCAAAGGAGCCACACTAACTGAGATCCCTCAGGATACGCCAAGAAAGACGAAGGACGGTAGCGATGGCAGGAGTGCAACTGGCGAAGGCTCAGGCATTAAGGGATGCATTGAGCATAGGCGTGATGCCAAGCGTGCATCAGAGCTGATTCTGTTGGGCCAGGGTGGACGGACAGGTGATCAGTCTTCTTCAAGTATTAGGACACGACAGATTTTATTCCCTGCATTTAATGAAACCTCAAAGGTCAACTTGGTTGTGGAAAAGGTTAGCACATGCACTTTTGTACGTTTCATACAGCCAGATATTGGTGTTGAAATATCAAATGGTGCTGGATACCTTGGCAGCTTCATGTGGGATCCACTAGGACGTTCTTAAAATGTCATGTGGGAAACTGCAGATTGCCCCTTATAGTCTAATATACATTAAGGGCATCAATAAGTCTTCCTCCTCCTATACTCAGGATGGCTTTACAATACCCCCCCCCAAATTAATCCACATTTGCTTTTGACAACATCATTGGGATGACTTTAAAATGAATGTGTCTAAAGAATTGCTACCTGGTGGAAAATATACATTGACTAAAATCAAGACTTGTTTTATATAACCGTTACATATGATATATTTTACAGTTATCTAGCATATGTAGCACTGAAACCTAAACATGCCATAGATTTGAGCCTACATTTATGGTGAGAATGATTACTATTGCCGTAGCACAGTGGGTATTTTTAAATAATTTTGAATATGAATGCAAACAGACTTGTTCAGTTTCAATAATATAATGAAACTTTAAAGCTACTTCAAAGGTTACAAGGCTGGTGTTGTGTCCATGCATTGAGTGTTAAACTCTCTTAATCGAACAGATTTAAACATTTGTATCTCCACCTATAGCAAAGTGTTTTTGATTACTGATGTTTTGTTGTTGAAATAATCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTCTCAATTCAGTTCAATTCAATTCAGTTCACTTAGCTTTACTGACATGACTGCGTAGAATAGCACAATGTTGCAAAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07008484_07018990.mRNA True 1894 mRNA 0.46 6 7008484 7019663

Neighbor

gene id symbol gene type direction distance location
CI01000050_06966299_06980426 NA coding upstream 27861 6964336 ~ 6980623 (+)
CI01000050_06890038_06920728 NA coding upstream 87497 6889901 ~ 6920987 (+)
CI01000050_06833217_06853313 ACOT7 coding upstream 155134 6833089 ~ 6853350 (+)
CI01000050_06831107_06831911 HES2.2 coding upstream 176102 6831044 ~ 6832382 (+)
CI01000050_06814252_06815192 NA coding upstream 192858 6814164 ~ 6815626 (+)
CI01000050_07078547_07104277 TAS1R2.1 coding downstream 57470 7077133 ~ 7104600 (+)
CI01000050_07107277_07123150 SULT1ST1, SULT1ST2, SULT1ST3 coding downstream 86931 7106594 ~ 7123184 (+)
CI01000050_07124003_07124284 NA coding downstream 104340 7123887 ~ 7124393 (+)
CI01000050_07221976_07238268 QARS coding downstream 202112 7221775 ~ 7238459 (+)
CI01000050_07250416_07306801 MTOR coding downstream 230753 7250416 ~ 7306801 (+)
G216571 NA non-coding upstream 56064 6941038 ~ 6952420 (+)
G216552 NA non-coding upstream 200405 6807767 ~ 6808079 (+)
G215774 NA non-coding upstream 300562 6706010 ~ 6707922 (+)
CI01000050_06413155_06428371 NA non-coding upstream 584939 6412512 ~ 6428983 (+)
G216612 NA non-coding downstream 54056 7073719 ~ 7074023 (+)
G216621 NA non-coding downstream 77910 7097573 ~ 7098289 (+)
G216845 NA non-coding downstream 128431 7148094 ~ 7148301 (+)
G216843 NA non-coding downstream 135881 7155544 ~ 7156894 (+)
G215773 NA other upstream 342781 6661188 ~ 6665703 (+)
G215539 NA other upstream 1377281 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1598836 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 2415435 4589926 ~ 4593049 (+)
G214717 NA other upstream 2900204 4107582 ~ 4108280 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036717 gpr153 coding NC_007119.7 CM002892.2 46656170 ~ 46700278 (-)
bowfin (Amia calva) AMCG00002192 gpr153 coding CM030136.1 CM030136.1 6635934 ~ 6655887 (+)