CI01000050_06966299_06980426


Basic Information

Item Value
gene id CI01000050_06966299_06980426
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 6964336 ~ 6980623 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_06966299_06980426.mRNA
ATATTAAAAGACATGAAAGTATGGGAGAAGGTGGGAAGTGTGAAAGTCTTGTTTATATCCTGGTTTCTTAGAGTTGTGTTACAACATCTTTATGTCTATGCTCCTGGGCAGAATTTGGTGAGCCTGGATAGATTGCCAGTGGTTTGAAATGTTCTTCATTTTAAATCCTTAACTCTTAAGAATTCTTAAGAATTTCTTCAGAGGATTTGGGAAACACAACATAAGGTTCTTATGTAAACCTCCCCAGTAATTATCTATTAAAAAAAAAGAATTAGAAGAACTGAAGGATGGAGGCATGGCTGAGCTCAGCATCAATGAGAAATTAAGTGATCTGATGATCACTAATGACACCCACCACAGTTGAACACAGCGCCCCAACAAATATACAACATCCGCACCGCCACCATAGTACCCTCAGACGTTTCACCATTGTCAGCAGAGGAGAACCGAGGAACTATGTACACATTGTTATTGTTGTGGTAGCAGCAGTGAGCACTTTTCAGCAGGCTGCAGAACTAGAGCCACAAAAGTAGAACTCCTTTAAACGGGAATGGATTGCCTCCACTGGACAGGGAGTGAGCCAAACCGCCAAAATGTCCCTTCAACATCCAAAGCAACCCTTTGAAAATGCAGAGCAACATGTGAAAGAGCTTGTCATTCGTGTTCTTGTCTTAAAAGATCAAAGGTTATCTGAGCTAATCATTGGCTACAATGTGATTGAACAAGTGATGAAGCAGAGTGAAGTTAATGAAAACAAAAAACAACAGACCTTCAGGACAGACCTTGACCACATGACCACGGCGGATCCTAGTGAATACCTGTTGAAAACAACAAAAGACCCTGTGAACATACCAAAACTTATAATTTTGCAGATACGGTGTCAAGTTAAAGTGCTGTATGTGAAGCAGGATAGTGTTCTGTTAGAACCACATGTAAACCTGCAGTGTCTCGAAGCCCTGAAACCTTGGAACTCTAAAAAAGGGGAAAAAAGTCCAGTGGTCAAGATCAGTGTCCAGAACATCACAGACCATAAAATCAGGCTTGCAGGGAAAACTGAGCTTGGGACAATGCAGTCAATAAAGTCTGTACAAAAGTCTGTGCTGCAGCATCACTTTGTGCAACAACAGCCAGTGTCAATGAGGTTGCAAAAGACACCAGTGTGGTTGGATGTAACAGTGAAGAATTGTGGGACCCATTTCTTAATACCCATTGTAGTACACAAACCTAGCATTGAGTTGCCTGATCTCTCTCTACCAAATTCTCTGACGCATTTCCTGCCTGTGTTGACCCCTGCACAGTCAAGGAAATTTGAAAATACTGTTGACCTGTCAGACACTGTTATTATCTTTCAGCCTAATTGTGAAAAATGCGAGTTGAGTGTTGTGCCTGAAATTGTCACAGAACCTACTGAATCAAGTGCAGTACCAAATTTTTCTCTAAAGTGTGTGGGACAGGGTCAGGAGCGACCAGTGGAAGCAAAATTTTGTGCCATTATTGAGTTTACTACCCCGACTAACAAGCGATTTGTACAGCACTGGACTGGCTCTCAGTGCACGTTCTCCTCCTCTGCCCAACCCCAGTGCCCCCTCACACTGCTATGCCCCTCACCCTATCCTCTCAGCACATCCAGAGGAAGGACTGCCTGTCCCTCTCTCACCAGCAGGCTGCTCATCATGAACGATGAGGTCATCAGCACTAATGCACTGGCCTGGCTGGTCTGCTCGGGAGTGTCCATCCTGGCCAATGCCTGGGGAATCCTGAGCGTGAGCGCCAAGCAGAAGAAGTGGAAGCCACTGGAATTCCTCATCTGCACACTGGCTGGCACGCACATTCTTAACATGGGCATCCCCATCACCATGTACTGTGTCATACAGCTGCGCCGACAACACTCCAACTATGAGTGGAATGAAGGACTCTGCAAGGTCTTTGTCTCCACTTTCTATACCCTTACCCTGGTCACCTGTTTCTCAGTCACCTCCCTGTCCTACCACCGCATGTGGATGGTCCGCTGGCCGGTCAACTATAGGTAAGTGAAAGACACTTGAGCTGACCTTTGTTGACATAAGAATTGGATTTTATAGTTCGGAATTTATAGTGCGAAAATTATTACATTTTGAAAATGCCTACCTATTAAAAAAAAACTTAACTGGCTTTGAAATGTAGGTCATTTATGTGTATTGAATGAAACGAGGTAAACTAAAAAATTAGCTTGGTTTTTATAAGATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_06966299_06980426.mRNA False 2227 mRNA 0.44 7 6965706 6980623

Neighbor

gene id symbol gene type direction distance location
CI01000050_06890038_06920728 NA coding upstream 44719 6889901 ~ 6920987 (+)
CI01000050_06833217_06853313 ACOT7 coding upstream 112356 6833089 ~ 6853350 (+)
CI01000050_06831107_06831911 HES2.2 coding upstream 133324 6831044 ~ 6832382 (+)
CI01000050_06814252_06815192 NA coding upstream 150080 6814164 ~ 6815626 (+)
CI01000050_06704526_06704754 NA coding upstream 259820 6704526 ~ 6705886 (+)
CI01000050_07008484_07018990 NA coding downstream 27861 7008484 ~ 7019663 (+)
CI01000050_07078547_07104277 TAS1R2.1 coding downstream 96510 7077133 ~ 7104600 (+)
CI01000050_07107277_07123150 SULT1ST1, SULT1ST2, SULT1ST3 coding downstream 125971 7106594 ~ 7123184 (+)
CI01000050_07124003_07124284 NA coding downstream 143380 7123887 ~ 7124393 (+)
CI01000050_07221976_07238268 QARS coding downstream 241152 7221775 ~ 7238459 (+)
G216571 NA non-coding upstream 13286 6941038 ~ 6952420 (+)
G216552 NA non-coding upstream 157627 6807767 ~ 6808079 (+)
G215774 NA non-coding upstream 257784 6706010 ~ 6707922 (+)
CI01000050_06413155_06428371 NA non-coding upstream 542161 6412512 ~ 6428983 (+)
G215702 NA non-coding upstream 606876 6358573 ~ 6358830 (+)
G216612 NA non-coding downstream 93096 7073719 ~ 7074023 (+)
G216621 NA non-coding downstream 116950 7097573 ~ 7098289 (+)
G216845 NA non-coding downstream 167471 7148094 ~ 7148301 (+)
G216843 NA non-coding downstream 174921 7155544 ~ 7156894 (+)
G215773 NA other upstream 300003 6661188 ~ 6665703 (+)
G215539 NA other upstream 1334503 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1556058 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 2372657 4589926 ~ 4593049 (+)
G214717 NA other upstream 2857426 4107582 ~ 4108280 (+)

Expression


Co-expression Network