CI01000050_07221976_07238268 (QARS)


Basic Information

Item Value
gene id CI01000050_07221976_07238268
gene name QARS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7221775 ~ 7238459 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07221976_07238268.mRNA
GTTTAAATAAATCTACTTAACAATATGTTGCACTTCACACAGCAACGCTCGACTGATGCAACAAAGTGTCAACAGAGGAGGCGCATCGATGATTGGTGGAAGGATGCGCGAAAGCAAATCTGATTGGAGAAATCATGGTTCGTACTACGCCTTTCTCCAGCACTGGAGGAAGTGTAAACCGGCGTGTGTGCAGGAAGGGAAATGGCGGACGCGGTGTCTATTTTCATGTCAATTGGCCTTAGTGAGCAGAAAGCTAAGGAAACATTGAAAAATGAAACGCTTTCATCAACACTCAAGAAGGCCATCGAACTGGCTCAAGGGCTTGGGTCCGCTGGTATTGATAAAACTACAGGCACTCTGTTGTACAGTATGGTGACACGACTTAAAGACACGAATCGACTTTCTTTCCTCACAGAGTACATCATTAAACGAAAAATAACCACGGAACTGCAGTTGTCAGCGGCGTTGGACTTTGTGAAAAGTCACCCTCAGGATCATGTAGATCGGCGTGAGTTTGAGACTGCCTGTGGGGTGGGAGTGGTGATCACACCTGAACAGATAGAGGATGCAGTGGAATTGATTATCAAGAAACACAAAGATCAGCTGCTGGCAGAGAGGTACCGCTTCAACATGGGAATACTCATGGGTGAGGCTAGAGCCACTCTCAAATGGGCTGATGGAAAGATTGTCAAGAATGAAGTAGATATGCAGGTACTGCACCTTCTGGGTCCAAAAACAGAGGCAGATCTGGAGAAAAAGCCCAAGGTTATATTGCAGCAGTCCAAAATTACTGCAAAAATCACAAAAATAGGCAAAATGACAAAAATAGGAATTGGTGTCTGCCATCTGAATGCAGCCAAAACCAAAGCTGCAGAGAAAGATGTGAAGATTGAGCAGGTTTCTGAAGTAAACGGTGAAGGAGAAACAGAGAGAAAATCATTGATGGAGCAGCTGAGAGGAGAGGCGCTGAAGTTCCATAAGCCAGGGGAGAATTACAAGACGGAGGGTTATGTTGTAACTCCCAACACCATGAATTTGCTGAAGAAGCACCTGGAAGTCACTGGAGGACAGGTCCGCACCCGTTTTCCCCCTGAGCCTAATGGTATTCTGCATATTGGTCATGCCAAAGCAATCAATTTCAATTTTGGTTATGCCAAGGCCAATAATGGCATCTGTTTCCTGCGGTATGACGACACAAACCCAGAGAAAGAGGAGGAGAAGTACTTTACTGCCATCAAAGACATGGTGGAGTGGCTTGGGTACAGACCATACAATGTCACGCACGCCTCTGATAACTTCCAGCTTCTCTACGATCTTGCTGTTGATCTCATTCGCAGGGGTCATGCGTATGTGTGCCACCAGCGTGGAGAGGAGCTCAAGGGTCACAACATCCCTCCCTCCCCCTGGAGAGAGCGACCCGTGGATGAGTCTTTGGTTTTGTTTGACAGGATGAGGAAGGGCATGTTTGCAGAAGGGGAAGCCACTCTTAGAATGAAGATGGTCATGGAAGATGGTAAAATGGACCCTGTGGCGTACCGGATCAAATACATGCCACATCACAGGACAGGAGACGCATGGTGCATATACCCCACGTATGATTACACACACTGTCTATGTGACTCCATTGAGCACATCACACACTCACTGTGCACCAAAGAGTTTCAGGCCAGACGATCATCATATTACTGGTTGTGTAATGCTCTGGATTTATACTGTCCGGTGCAGTGGGAATATGGCCGACTCAACCTTACGTATACTGTTGTTTCCAAGAGGAAGATCATCAAACTGGTGGAAACAGGAATTGTTAGAGATTGGGATGATCCACGACTCTTCACCCTCACAGCTCTCAGGAGACGTGGGTTCCCTCCACAAGCTATCAACAACTTCTGTGCCCGGGTGGGTGTGACTGTTGCCCAGACCACCATGGAGCCACACCTGTTGGAGGCGTGTGTGAGGGAGGTCCTTAATGACATTGCCCCTCGTGCCATGGCCATACTCGAGCCCCTGAAAATCACCATCACCAACTTACCAAGCAATGCACAGAAGGAGCTTCGAGTCCCAGACTTTCCAGCCAATGAAGCCAAGGGCAGACATGTGGTTCCCTTCTCAAAGACCATCTTTATTGAGCAGAGTGACTTTAGAGAGGTGATGGAGAAGGGCTATAAGCGCCTGACTCCAGATCAGCCGGTAGGCTTGAGACATGCAGGATACGTCATATCTGTACAGCGTGTCATTAAGGATAACTGTGGTAAAGTGTGTGAGCTAGAGGTGACGTGTTCCAGCTCAGACTCTGTGGAGAAACCCAAAGCATTCATTCATTGGGTGAGCGAGCCACTGCAGTGTGAAGTGCGCCTGTATGAAAGCCTGTTTCTCCATAAACATCCAGAGGACCCAGCTGAAGTTCCTGCTGGATTCCTGAGTGACATTAATCCTCTGGTGTTCAACAGGACTGTTACCCTCAAGGAGGACCCAGGAAAGATATGATTGGGCTGAGAAGTTGTACTTTGACATCAACCATGCATCACAAAGCAGTTTTCAATATACCATTTCAAATAATCCGGGGAATTCAATGTATTCTAGTATTCCATCTATACTATGAAAAGTCTTTTTTAACTCTCAGGTGCTAAGCTATTTTGTACAACCTATTCATTCTGCTGGGGTTTGTCATCCATGAA

Function

symbol description
qars Predicted to enable several functions, including glutamine-tRNA ligase activity; protein kinase binding activity; and protein kinase inhibitor activity. Predicted to be involved in several processes, including glutaminyl-tRNA aminoacylation; negative regulation of nitrogen compound metabolic process; and negative regulation of signal transduction. Predicted to act upstream of or within negative regulation of apoptotic process. Part of aminoacyl-tRNA synthetase multienzyme complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Orthologous to human QARS1 (glutaminyl-tRNA synthetase 1).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01886 QARS, glnS; glutaminyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07221976_07238268.mRNA True 2675 mRNA 0.47 23 7221775 7238459

Neighbor

gene id symbol gene type direction distance location
CI01000050_07124003_07124284 NA coding upstream 97433 7123887 ~ 7124393 (+)
CI01000050_07107277_07123150 SULT1ST1, SULT1ST2, SULT1ST3 coding upstream 98591 7106594 ~ 7123184 (+)
CI01000050_07078547_07104277 TAS1R2.1 coding upstream 117175 7077133 ~ 7104600 (+)
CI01000050_07008484_07018990 NA coding upstream 202112 7008484 ~ 7019663 (+)
CI01000050_06966299_06980426 NA coding upstream 241152 6964336 ~ 6980623 (+)
CI01000050_07250416_07306801 MTOR coding downstream 11957 7250416 ~ 7306801 (+)
CI01000050_07312365_07324523 NA coding downstream 72122 7310581 ~ 7324673 (+)
G216823 NA non-coding upstream 6471 7208443 ~ 7215304 (+)
G216826 NA non-coding upstream 37850 7178673 ~ 7183925 (+)
G216852 NA non-coding upstream 46603 7174973 ~ 7175172 (+)
G216850 NA non-coding upstream 48100 7173048 ~ 7173675 (+)
G216843 NA non-coding upstream 64881 7155544 ~ 7156894 (+)
G216825 NA non-coding downstream 110747 7349206 ~ 7367142 (+)
G215773 NA other upstream 556072 6661188 ~ 6665703 (+)
G215539 NA other upstream 1590572 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1812127 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 2628726 4589926 ~ 4593049 (+)
G214717 NA other upstream 3113495 4107582 ~ 4108280 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location