CI01000050_07124003_07124284


Basic Information

Item Value
gene id CI01000050_07124003_07124284
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 7123887 ~ 7124393 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_07124003_07124284.mRNA
AAAGAACTTGTAGACCAGAATCGGGAACTGACAGTGAAAAAGACAGTATGCTGGTACGGACAAGCAAGGAGGATTTCACTAATGAAGTCTGCAGATGATTTTGTGATCAATCCAGTAAAACTGACCAAAGCAATAAAGAAAGCAATAGGAGATGTAGAGAGTGCCAAGACTTTGAGAAATGGGAATATTCTAATTTTCTGTAAAAATGGAAAAACAACAGAAAGTGGCACAGGGCATAAAATCAGTGCTAGGTCAATCGGTGAGTTGCACAGTACCAAGTAAGAGAGTCTGGTTAAAGGGAGTGATCTATGGAATTCCAATTGATGTATCTACTGACTCA
>TU245675
GGAGCATTGATGGAAGGAAGTGACGGTAGTACCGGAAGTGATCCGGAGATGGAGGAAGAATGTAGCGGTAGGAGTTCAGGAGTAAATGATTGGAGTAAAATTGTTAATCATAAAAGAAAGAACTTGTAGACCAGAATCGGGAACTGACAGTGAAAAAGACAGTATGCTGGTACGGACAAGCAAGGAGGATTTCACTAATGAAGTCTGCAGATGATTTTGTGATCAATCCAGTAAAACTGACCAAAGCAATAAAGAAAGCAATAGGAGATGTAGAGAGTGCCAAGACTTTGAGAAATGGGAATATTCTAATTTTCTGTAAAAATGGAAAAACAACAGAAAGTGGCACAGGGCATAAAATCAGTGCTAGGTCAATCGGTGAGTTGCACAGTACCAAGTAAGAGAGTCTGGTTAAAGGGAGTGATCTATGGAATTCCAATTGATGTATCTACTGACTCAATAAAGAGCAACATAAAAGGTGATTGAAGTGAAAAGACTGAAATGTGTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_07124003_07124284.mRNA False 340 mRNA 0.39 1 7124003 7124342
TU245675 True 507 lncRNA 0.39 1 7123887 7124393

Neighbor

gene id symbol gene type direction distance location
CI01000050_07107277_07123150 SULT1ST1, SULT1ST2, SULT1ST3 coding upstream 819 7106594 ~ 7123184 (+)
CI01000050_07078547_07104277 TAS1R2.1 coding upstream 19403 7077133 ~ 7104600 (+)
CI01000050_07008484_07018990 NA coding upstream 104340 7008484 ~ 7019663 (+)
CI01000050_06966299_06980426 NA coding upstream 143380 6964336 ~ 6980623 (+)
CI01000050_06890038_06920728 NA coding upstream 203016 6889901 ~ 6920987 (+)
CI01000050_07221976_07238268 QARS coding downstream 97433 7221775 ~ 7238459 (+)
CI01000050_07250416_07306801 MTOR coding downstream 126074 7250416 ~ 7306801 (+)
CI01000050_07312365_07324523 NA coding downstream 186239 7310581 ~ 7324673 (+)
G216621 NA non-coding upstream 25714 7097573 ~ 7098289 (+)
G216612 NA non-coding upstream 49980 7073719 ~ 7074023 (+)
G216571 NA non-coding upstream 171583 6941038 ~ 6952420 (+)
G216552 NA non-coding upstream 315924 6807767 ~ 6808079 (+)
G216845 NA non-coding downstream 23752 7148094 ~ 7148301 (+)
G216843 NA non-coding downstream 31202 7155544 ~ 7156894 (+)
G216850 NA non-coding downstream 48706 7173048 ~ 7173675 (+)
G216852 NA non-coding downstream 50631 7174973 ~ 7175172 (+)
G216826 NA non-coding downstream 54331 7178673 ~ 7183925 (+)
G215773 NA other upstream 458300 6661188 ~ 6665703 (+)
G215539 NA other upstream 1492800 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1714355 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 2530954 4589926 ~ 4593049 (+)
G214717 NA other upstream 3015723 4107582 ~ 4108280 (+)

Expression


Co-expression Network