G215539


Basic Information

Item Value
gene id G215539
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5629610 ~ 5631203 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU244520
TCAAAGTGAACTAATCCTTTAATGGTGCATAAAACCTGTTTTCTTTTGCATTTGGGTTGAAATGTGAATCCTTCATGAAAGGGGAAAAAATAATTCAATTATTTTCACAGCCCAATGAAATATTGGCTGATAACCTTTTGTGTGTGTTTTGAGAGACAAAATCAACTAATTAAATCGGTTTCATTTATTATCAATTGTTGGGACAGGATGTTTCCTGTTTTTATTATGATGTGCGACTCTGCCAGATCTGAGCCTTTACAAAACGGCCTGGCATGCCATGATAGTAGAAGTACCATCGGTAAGCAGAATAATACAAACATTTAATAGTGGGAATAATTCTTTAAGCTCATGCTCATAATAGAAAACGATCCAACATTTTTGCTAAGCAACACCCCAATTCAGTTTTTCTGTGGACGTGGTACATAAACAGTACAGAAATGAAGTTTGACAGCATGAGAATGACCTGAGGTAGCAAAAGATGTCACACAATCAAATGTTTACCCAGAGATAGACAGCCAGAGGCCATTAATGTGCTTCATTCTCGAATATATTACACTCAGGATACAGCATTTTATTATGCTAAGCAAAAAATCTTTTAAGGGGCGATAGTACTATGGTGTGGTTTCAGATGCCGTTCTCTCAGCGTTTATCATGACGGCCTTTAAGGTGGAAGGGCGCTGAGACAAACGGGTCACCAGAAGCCATGTCAGACGTCAGATTGTGATGATGCTCACCACTCGGTTTGTGCTCAGGGTCTGTGTTCATGGGTCCTTCGTAGTGTCTGGAATACTTCGAAAGTGCCTGGGGTCGAAAGGGCAGAGGCGTCACTTGCCCAAGGATGCTCTGGTCAAGGGAAGAACCTGGATGGGGGTGTAAATATCTCTGCTGGGCCGCAGGATTGGTGTAAACCATTCCAGGAGTTTCCTTCTTCCTACCAAAGGGGGCTTGGAGGAAAATATCAGGCTGTTGAGGCTGAGCTGGCGGACGAGGAAAAGGTGCATTGGCGAATACATCTCCATCGCTGTCACCGTCTTGTCCGATCCGAAATGGAGCTTTGGAGAAGACATCGACGCCTGGATCTGCGCCTGAATGATGGGTATGTGACACCAGCTGTGGCGAGTGGTTCTGAGCGCGGACAGAAACCAGAGAGGACTGGTTTTCAATTGGTACCTCGGATTCGGAAGACATCTGGAGGTTCCTTGAAGATGCGGGGCTTTGGTCATCGTCGTCATCCGAGTCTTGAAGTAATGGTCGGGAGCCACTGCAGTCCAGACTTGGAGTTTCTTCTCCACTCACCTGTGACCTCCCCCCATCTTTTTCTCCATCGTCTTCATCACTGGAATGAAGACAGTCCTCCACGGGGTCTTCGACATCCCCTCCCTCTAAAAGCATTCCATATCCAT
>TU244521
TCAAAGTGAACTAATCCTTTAATGGTGCATAAAACCTGTTTTCTTTTGCATTTGGGTTGAAATGTGAATCCTTCATGAAAGGGGAAAAAATAATTCAATTATTTTCACAGCCCAATGAAATATTGGCTGATAACCTTTTGTGTGTGTTTTGAGAGACAAAATCAACTAATTAAATCGGTTTCATTTATTATCAATTGTTGGGACAGGATGTTTCCTGTTTTTATTATGATGTGCGACTCTGCCAGATCTGAGCCTTTACAAAACGGCCTGGCATGCCATGATAGTAGAAGTACCATCGGTAAGCAGAATAATACAAACATTTAATAGTGGGAATAATTCTTTAAGCTCATGCTCATAATAGAAAACGATCCAACATTTTTGCTAAGCAACACCCCAATTCAGTTTTTCTGTGGACGTGGTACATAAACAGTACAGAAATGAAGTTTGACAGCATGAGAATGACCTGAGGTAGCAAAAGATGTCACACAATCAAATGTTTACCCAGAGATAGACAGCCAGAGGCCATTAATGTGCTTCATTCTCGAATATATTACACTCAGGATACAGCATTTTATTATGCTAAGCAAAAAATCTTTTAAGGGGCGATAGTACTATGGTGTGGTTTCAGATGCCGTTCTCTCAGCGTTTATCATGACGGCCTTTAAGGTGGAAGGGCGCTGAGACAAACGGGTCACCAGAAGCCATGTCAGACGTCAGATTGTGATGATGCTCACCACTCGGTTTGTGCTCAGGGTCTGTGTTCATGGGTCCTTCGTAGTGTCTGGAATACTTCGAAAGTGCCTGGGGTCGAAAGGGCAGAGGCGTCACTTGCCCAAGGATGCTCTGGTCAAGGGAAGAACCTGGATGGGGGTGTAAATATCTCTGCTGGGCCGCAGGATTGGTGTAAACCATTCCAGGAGTTTCCTTCTTCCTACCAAAGGGGGCTTGGAGGAAAATATCAGGCTGTTGAGGCTGAGCTGGCGGACGAGGAAAAGGTGCATTGGCGAATACATCTCCATCGCTGTCACCGTCTTGTCCGATCCGAAATGGAGCTTTGGAGAAGACATCGACGCCTGGATCTGCGCCTGAATGATGGGTATGTGACACCAGCTGTGGCGAGTGGTTCTGAGCGCGGACAGAAACCAGAGAGGACTGGTTTTCAATTGGTACCTCGGATTCGGAAGACATCTGGAGGTTCCTTGAAGATGCGGGGCTTTGGTCATCGTCGTCATCCGAGTCTTGAAGTAATGGTCGGGAGCCACTGCAGTCCAGACTTGGAGTTTCTTCTCCACTCACCTGTGACCTCCCCCCATCTTTTTCTCCATCGTCTTCATCACTGGAATGAAGACAGTCCTCCACGGGGTCTTCGACATCCCCTCCCTCTAAAAGCATTCCATATCCATCACTCTTCCTTCTGGCTTCTGCAAAACAGAAAACCGTAAAAAAGAAAATTGATAATTAGTGACATTTTCGCAAAAACTCTACAGTATGAATTCAATAGCAGGAGAATCATTATGGACAATCAATGATTGTGACCAAAAAGTATTTTGCCATTCTGTAGTACTACAGAATGAAAAACAAAAGTTTGAAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244520 False 1403 TUCP 0.45 1 5629610 5631012
TU244521 True 1594 TUCP 0.44 1 5629610 5631203

Neighbor

gene id symbol gene type direction distance location
CI01000050_05545206_05550365 NA coding upstream 79060 5543514 ~ 5550550 (+)
CI01000050_05529488_05530765 NA coding upstream 98188 5527162 ~ 5531422 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding upstream 220193 5407585 ~ 5409417 (+)
CI01000050_05388158_05405937 NA coding upstream 223569 5388062 ~ 5406041 (+)
CI01000050_05382547_05383818 NA coding upstream 245744 5382043 ~ 5383866 (+)
CI01000050_05774182_05793383 WRAP73 coding downstream 142979 5774182 ~ 5793898 (+)
CI01000050_05819139_05823958 NA coding downstream 187871 5819074 ~ 5823958 (+)
CI01000050_05845707_05846552 NA coding downstream 214076 5845279 ~ 5846840 (+)
CI01000050_05881217_05905972 MFN2 coding downstream 250014 5881217 ~ 5906281 (+)
CI01000050_06086847_06251892 PRDM16 coding downstream 455644 6086847 ~ 6251892 (+)
G215541 NA non-coding upstream 245 5621501 ~ 5629365 (+)
G215556 NA non-coding upstream 8921 5620481 ~ 5620689 (+)
G215551 NA non-coding upstream 17563 5611598 ~ 5612047 (+)
G215533 NA non-coding upstream 24477 5596928 ~ 5605133 (+)
G215527 NA non-coding upstream 70972 5558329 ~ 5558638 (+)
G215544 NA non-coding downstream 2947 5634150 ~ 5637539 (+)
G215588 NA non-coding downstream 87761 5718964 ~ 5719453 (+)
G215536 NA non-coding downstream 164185 5795388 ~ 5798253 (+)
G215631 NA non-coding downstream 194016 5825219 ~ 5825659 (+)
G215645 NA non-coding downstream 206061 5837264 ~ 5837596 (+)
CI01000050_04591548_04592778 NA other upstream 1036561 4589926 ~ 4593049 (+)
G214717 NA other upstream 1521330 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 1672566 3931890 ~ 3957044 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 1820871 3805143 ~ 3808870 (+)
G215773 NA other downstream 1029985 6661188 ~ 6665703 (+)

Expression


Co-expression Network