G215588


Basic Information

Item Value
gene id G215588
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5718964 ~ 5719453 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU244572
TAAAAAGGTAAAAATGCAGTTAAAAGGTAAAAATTAGAGATCATGTCAGATATTATGTATCGGCTAACAGTCGGTATCGGCCGATAAAAACTATTATTATCACTATTGTTTAAAAACTGCCGATGGTCAGGGTTGATTATATCCTGTCAATCAAAAGGGTGCGGAAAGACGAGTTCAGACTGCAACTCATACATACTGTGTGTGAAGAAAATCACTCGGTTGCCAGGTCTGCATTTTTTTCCTACATCAAATATTATTTGTAGCGCCTCCCATCCAATAATCGCAAAAAGATTTGTGCTTTATTACTTCTGATAAGAATTAAAGTTTCAGTTTTCAAATTCTGTCCATTTTATCATGAAATTCAAACAATAAATACCGGTTTGACACTCTTAAATGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244572 True 400 lncRNA 0.34 2 5718964 5719453

Neighbor

gene id symbol gene type direction distance location
CI01000050_05545206_05550365 NA coding upstream 168414 5543514 ~ 5550550 (+)
CI01000050_05529488_05530765 NA coding upstream 187542 5527162 ~ 5531422 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding upstream 309547 5407585 ~ 5409417 (+)
CI01000050_05388158_05405937 NA coding upstream 312923 5388062 ~ 5406041 (+)
CI01000050_05382547_05383818 NA coding upstream 335098 5382043 ~ 5383866 (+)
CI01000050_05774182_05793383 WRAP73 coding downstream 54729 5774182 ~ 5793898 (+)
CI01000050_05819139_05823958 NA coding downstream 99621 5819074 ~ 5823958 (+)
CI01000050_05845707_05846552 NA coding downstream 125826 5845279 ~ 5846840 (+)
CI01000050_05881217_05905972 MFN2 coding downstream 161764 5881217 ~ 5906281 (+)
CI01000050_06086847_06251892 PRDM16 coding downstream 367394 6086847 ~ 6251892 (+)
G215544 NA non-coding upstream 81425 5634150 ~ 5637539 (+)
G215541 NA non-coding upstream 89599 5621501 ~ 5629365 (+)
G215556 NA non-coding upstream 98275 5620481 ~ 5620689 (+)
G215551 NA non-coding upstream 106917 5611598 ~ 5612047 (+)
G215533 NA non-coding upstream 113831 5596928 ~ 5605133 (+)
G215536 NA non-coding downstream 75935 5795388 ~ 5798253 (+)
G215631 NA non-coding downstream 105766 5825219 ~ 5825659 (+)
G215645 NA non-coding downstream 117811 5837264 ~ 5837596 (+)
G215646 NA non-coding downstream 118188 5837641 ~ 5837855 (+)
G215641 NA non-coding downstream 119803 5839256 ~ 5840153 (+)
G215539 NA other upstream 87761 5629610 ~ 5631203 (+)
CI01000050_04591548_04592778 NA other upstream 1125915 4589926 ~ 4593049 (+)
G214717 NA other upstream 1610684 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 1761920 3931890 ~ 3957044 (+)
G215773 NA other downstream 941735 6661188 ~ 6665703 (+)

Expression


Co-expression Network