G215631


Basic Information

Item Value
gene id G215631
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5825219 ~ 5825659 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU244625
CTCTGGAGATGAATTGGGGCCCTCTATCTGACACGATGTCCTCCGGGATTCCGTAGTACCTGAAGATATGGTTGAACATGAGCTCAGCAGTCTCCATGGCAGTGGGTAGTCCCTTTAAAGGAATCAGACGCACAGATTTAGAGAATCTGTCAACAACCACAAACACACAGGTACAGTCATTGGAAACAGGTAAGTCAGTGATAAAATCCACTCCTAGGTGTGACCAGGGTCTGTTGGCAACGGGCAGAGGATGGAGTTTTCCGGAGGGAAGATGACGAGGGGTTTCATTGACCCCAGGGTGGCCAGTGCCCAGTGACGTGTGGCTGGAGTGGATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244625 True 337 lncRNA 0.51 2 5825219 5825659

Neighbor

gene id symbol gene type direction distance location
CI01000050_05819139_05823958 NA coding upstream 1261 5819074 ~ 5823958 (+)
CI01000050_05774182_05793383 WRAP73 coding upstream 31321 5774182 ~ 5793898 (+)
CI01000050_05545206_05550365 NA coding upstream 274669 5543514 ~ 5550550 (+)
CI01000050_05529488_05530765 NA coding upstream 293797 5527162 ~ 5531422 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding upstream 415802 5407585 ~ 5409417 (+)
CI01000050_05845707_05846552 NA coding downstream 19620 5845279 ~ 5846840 (+)
CI01000050_05881217_05905972 MFN2 coding downstream 55558 5881217 ~ 5906281 (+)
CI01000050_06086847_06251892 PRDM16 coding downstream 261188 6086847 ~ 6251892 (+)
CI01000050_06261124_06264271 NA coding downstream 435465 6261124 ~ 6264830 (+)
CI01000050_06269145_06275358 NA coding downstream 443486 6269145 ~ 6275358 (+)
G215536 NA non-coding upstream 26966 5795388 ~ 5798253 (+)
G215588 NA non-coding upstream 105766 5718964 ~ 5719453 (+)
G215544 NA non-coding upstream 187680 5634150 ~ 5637539 (+)
G215541 NA non-coding upstream 195854 5621501 ~ 5629365 (+)
G215556 NA non-coding upstream 204530 5620481 ~ 5620689 (+)
G215645 NA non-coding downstream 11605 5837264 ~ 5837596 (+)
G215646 NA non-coding downstream 11982 5837641 ~ 5837855 (+)
G215641 NA non-coding downstream 13597 5839256 ~ 5840153 (+)
G215651 NA non-coding downstream 48605 5874264 ~ 5874863 (+)
G215653 NA non-coding downstream 84063 5909722 ~ 5909955 (+)
G215539 NA other upstream 194016 5629610 ~ 5631203 (+)
CI01000050_04591548_04592778 NA other upstream 1232170 4589926 ~ 4593049 (+)
G214717 NA other upstream 1716939 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 1868175 3931890 ~ 3957044 (+)
G215773 NA other downstream 835529 6661188 ~ 6665703 (+)

Expression


Co-expression Network