CI01000050_05845707_05846552


Basic Information

Item Value
gene id CI01000050_05845707_05846552
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5845279 ~ 5846840 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_05845707_05846552.mRNA
ATATAAAAGATGGGAAAATCTGCTGAAAATCATGAGATAAATTACATTCAAAAATTGTTCTTCAAATGGTTCGAATGGTTATTCTGCAAAGCGGAACAGCATTCCATGTATAGATATAAAAAAAATAAATATCTTGATTTTTCTTTTTTCTTTTTCTTTGACACAAATCAGTTCCAATTGTGTCAGACTGAATGAGGAAAAAACAAAGCTCACCAAATAGTGTCTTTAGAGCACTGGTGCTTTCAGCTCATCAAAAAGTTCATAGAGAGAGAACACCCTAACTGAAGATTGCAGACAACTATTTCCAGCACACCCGACCCTCCAATTACAGCAGATTGAAAGTTTGATGGGTTACCCAAACCAATTATTGTCACTTAGTTTCCAGAGGTAAAAATATCTTGCAAGGCAGAATTTGAGAGTTGCACAAAATGAGAGCAAGAGGAAAAAGGGAGAGGAGATTCACATACACCACAGTTACCACCCCCAAAAATGGCTTGTCTTCATGTCGCTGTCTATACCTTACTCCTGAAGAGCGGCTTGGCTCCAGGCCCACAGTACTCATTGTAGATGAGTTTGAAGAGGAAGAGGTGGAAAAGCGTGATGAGGGATGCCACACTGAACCAGAAGAGGAAGGGCAGGCCTGGGTACTGTTTGGCCATGTGGTCCTCGTGAGCCAAGATAGCCTTGACGTGCATCGTGTGTCTCAGGTCTTGCAGCTCCACGGGCTCGTTCATGCAGCCTGCCTCGCAGGCGTACAGCTTCACGGGTTTCTCCTGAGGCTTGACGGACACATGCAGGAAAGGTTTGCCTTCGACGTCCTGCAATACGGCCAGGTTGATAAGGTCTTTATTGTAATGGATACCCCTCAAAGAGTAGCTGTTGTGAAGAACATCTGGGTCTGCCTGGAACTGAAGGTGGTTTTCGGTGAACTGCAGACCTCCAAAACTAAGGACCATGCCTTGCATCATACCATGAGTGCCTGCTGCAACAAGTACTTTGCACCCTCTTTTCTGGAAAGTCAAGTTCCAGAGATTCACAAGCTGGAGGATCTGAGCTACGTTTGTCAGACGCTCTGGCCACAGGTTCTCAGCATGCATGGTGGCATGGCCGCTGAAGCAGTGGTCGGCATAATTCAGACTGGACTCCAGGCGTTCGTGCTCTTCTGCTGTAAGACTCTGATCTAGTATGGGTGCTGTGGAGGTTGACAGAATGTAGTATAGGGTGTTGTTGACTGTACGACTGGATGGAGTATGGGCGTCTGTGATCTTTCTGATTTCCACACCTGTAAAGCAGCAAAAGACTATGAAACATTTCCTTTTAGCTTCTTAAAGCAAGTGAACACATGAATAGAAACCCTAAATGAGTCATATCACACTTATCATTTTACTTTTTCCTGGAGGTCCACCAATGTTTTTTTTATATTTAGGCAAATCCACCAATCCATCAATTTTTTCCCCCCACCATTTTTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_05845707_05846552.mRNA True 1472 mRNA 0.44 2 5845279 5846840

Neighbor

gene id symbol gene type direction distance location
CI01000050_05819139_05823958 NA coding upstream 21321 5819074 ~ 5823958 (+)
CI01000050_05774182_05793383 WRAP73 coding upstream 51381 5774182 ~ 5793898 (+)
CI01000050_05545206_05550365 NA coding upstream 294729 5543514 ~ 5550550 (+)
CI01000050_05529488_05530765 NA coding upstream 313857 5527162 ~ 5531422 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding upstream 435862 5407585 ~ 5409417 (+)
CI01000050_05881217_05905972 MFN2 coding downstream 34377 5881217 ~ 5906281 (+)
CI01000050_06086847_06251892 PRDM16 coding downstream 240007 6086847 ~ 6251892 (+)
CI01000050_06261124_06264271 NA coding downstream 414284 6261124 ~ 6264830 (+)
CI01000050_06269145_06275358 NA coding downstream 422305 6269145 ~ 6275358 (+)
CI01000050_06302230_06302696 NA coding downstream 454895 6301735 ~ 6302764 (+)
G215641 NA non-coding upstream 5126 5839256 ~ 5840153 (+)
G215646 NA non-coding upstream 7424 5837641 ~ 5837855 (+)
G215645 NA non-coding upstream 7683 5837264 ~ 5837596 (+)
G215631 NA non-coding upstream 19620 5825219 ~ 5825659 (+)
G215536 NA non-coding upstream 47026 5795388 ~ 5798253 (+)
G215651 NA non-coding downstream 27424 5874264 ~ 5874863 (+)
G215653 NA non-coding downstream 62882 5909722 ~ 5909955 (+)
G215656 NA non-coding downstream 70766 5917606 ~ 5917920 (+)
G215679 NA non-coding downstream 95907 5942747 ~ 5942967 (+)
G215687 NA non-coding downstream 126480 5973320 ~ 5973546 (+)
G215539 NA other upstream 214076 5629610 ~ 5631203 (+)
CI01000050_04591548_04592778 NA other upstream 1252230 4589926 ~ 4593049 (+)
G214717 NA other upstream 1736999 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 1888235 3931890 ~ 3957044 (+)
G215773 NA other downstream 814348 6661188 ~ 6665703 (+)

Expression


Co-expression Network