G215687


Basic Information

Item Value
gene id G215687
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5973320 ~ 5973546 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU244686
GGAAGGATCCTCGGAAGCCAGAATTTCAAGGATGCTACGTCATCGACATCCGTCGAAGGACTGTTCCAATGTCGAGGATCCTCTGAATTTCAAACAAGGACTGAGTCCTTCGTTCGAAAAATATCCCATATACAGGAAAGGATGCATATGTGTAGCCTTCGCGCTCTTCGCGCTCTCAAATCACCCACAATCCTATGCGCGCAGCTTTGAGATCTTGTTCAAAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244686 True 227 lncRNA 0.46 1 5973320 5973546

Neighbor

gene id symbol gene type direction distance location
CI01000050_05881217_05905972 MFN2 coding upstream 67039 5881217 ~ 5906281 (+)
CI01000050_05845707_05846552 NA coding upstream 126480 5845279 ~ 5846840 (+)
CI01000050_05819139_05823958 NA coding upstream 149362 5819074 ~ 5823958 (+)
CI01000050_05774182_05793383 WRAP73 coding upstream 179422 5774182 ~ 5793898 (+)
CI01000050_05545206_05550365 NA coding upstream 422770 5543514 ~ 5550550 (+)
CI01000050_06086847_06251892 PRDM16 coding downstream 113301 6086847 ~ 6251892 (+)
CI01000050_06261124_06264271 NA coding downstream 287578 6261124 ~ 6264830 (+)
CI01000050_06269145_06275358 NA coding downstream 295599 6269145 ~ 6275358 (+)
CI01000050_06302230_06302696 NA coding downstream 328189 6301735 ~ 6302764 (+)
CI01000050_06307476_06308324 NA coding downstream 333930 6307476 ~ 6308696 (+)
G215679 NA non-coding upstream 30353 5942747 ~ 5942967 (+)
G215656 NA non-coding upstream 55400 5917606 ~ 5917920 (+)
G215653 NA non-coding upstream 63365 5909722 ~ 5909955 (+)
G215651 NA non-coding upstream 98457 5874264 ~ 5874863 (+)
G215641 NA non-coding upstream 133167 5839256 ~ 5840153 (+)
G215667 NA non-coding downstream 197468 6171014 ~ 6172887 (+)
G215722 NA non-coding downstream 298601 6272147 ~ 6272384 (+)
G215728 NA non-coding downstream 305683 6279229 ~ 6279465 (+)
G215702 NA non-coding downstream 385027 6358573 ~ 6358830 (+)
G215539 NA other upstream 342117 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 563672 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 1380271 4589926 ~ 4593049 (+)
G214717 NA other upstream 1865040 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 2016276 3931890 ~ 3957044 (+)
G215773 NA other downstream 687642 6661188 ~ 6665703 (+)

Expression


Co-expression Network