G215556


Basic Information

Item Value
gene id G215556
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 5620481 ~ 5620689 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU244540
GCACGGAGCGTTCTTTAGAACTTCCGCAATAGCTAATATAAGATAGCTCGAAAACTTCCGGTGATATGTAATTTGCTGGTGTGTTGAGCATCATACTTATTTTATAATCAGAATATAGTCACTTAAATAGTCAGGCATAGCATAAATTTAGTTATTCAAACGTAAGACAGCATAGAAAATAAATAAACAAAAAAGTACCTCAGTGTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244540 True 209 lncRNA 0.33 1 5620481 5620689

Neighbor

gene id symbol gene type direction distance location
CI01000050_05545206_05550365 NA coding upstream 69931 5543514 ~ 5550550 (+)
CI01000050_05529488_05530765 NA coding upstream 89059 5527162 ~ 5531422 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding upstream 211064 5407585 ~ 5409417 (+)
CI01000050_05388158_05405937 NA coding upstream 214440 5388062 ~ 5406041 (+)
CI01000050_05382547_05383818 NA coding upstream 236615 5382043 ~ 5383866 (+)
CI01000050_05774182_05793383 WRAP73 coding downstream 153493 5774182 ~ 5793898 (+)
CI01000050_05819139_05823958 NA coding downstream 198385 5819074 ~ 5823958 (+)
CI01000050_05845707_05846552 NA coding downstream 224590 5845279 ~ 5846840 (+)
CI01000050_05881217_05905972 MFN2 coding downstream 260528 5881217 ~ 5906281 (+)
CI01000050_06086847_06251892 PRDM16 coding downstream 466158 6086847 ~ 6251892 (+)
G215551 NA non-coding upstream 8434 5611598 ~ 5612047 (+)
G215533 NA non-coding upstream 15348 5596928 ~ 5605133 (+)
G215527 NA non-coding upstream 61843 5558329 ~ 5558638 (+)
G215511 NA non-coding upstream 164896 5455334 ~ 5455585 (+)
G215541 NA non-coding downstream 812 5621501 ~ 5629365 (+)
G215544 NA non-coding downstream 13461 5634150 ~ 5637539 (+)
G215588 NA non-coding downstream 98275 5718964 ~ 5719453 (+)
G215536 NA non-coding downstream 174699 5795388 ~ 5798253 (+)
G215631 NA non-coding downstream 204530 5825219 ~ 5825659 (+)
CI01000050_04591548_04592778 NA other upstream 1027432 4589926 ~ 4593049 (+)
G214717 NA other upstream 1512201 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 1663437 3931890 ~ 3957044 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 1811742 3805143 ~ 3808870 (+)
G215539 NA other downstream 8921 5629610 ~ 5631203 (+)
G215773 NA other downstream 1040499 6661188 ~ 6665703 (+)

Expression


Co-expression Network