CI01000050_06413155_06428371


Basic Information

Item Value
gene id CI01000050_06413155_06428371
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 6412512 ~ 6428983 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_06413155_06428371.mRNA
CTATTAAAGAATCCCAAAGAACAAGATTAGTCATTAAATTCATATTACCATGGTTGCATAACACCATTTAATGTGTTCAGAAAGTAACTGATTTACCTTTAACCCATTTACCTGGCCTGTCTGAAACACGTCTCTACACACAAAATGACGTGATTTTAAAAGTTGCAACACTGTTCTACAGTATGCTAATGCCATAAAGAGAAAGTTCAAAAACATAAAAGTAAAGGACTGAAATATAACTCAAAATATAAACTCGGTTACAATTTATTTTGATGCCCTCTCCCCCCTTAGACATTCTGTTGACTATAAGTAATGTTGCACCTATATGTCAACTAACAGTCATTAGAGAAGTAGTTGAGTATTAGTAGACTGTTAGTGTTCGGGTTAGTAGAATAAGATGACATGCACTTGCAAAGTTACTTATAGTCAGTAGAATGTCTGTTGGGGAACATCAAAATAAAGTATCAGTGGATATTAAGCAGACAGTCTACTAATACTCTACTAATACTCTAATGAGAGTTAGTTAACATGTAGGTGCAATGTTACTTATAGTTAAAAGGGGATCATCAAAATAGAATGTTACCATAAACTCTTTTTCAAACTCAATTTAAGATGATTTAAACAACAAAAATAAAATGTTGAAATGAGAATAAACTTCTTTCAATACTTGCAGACAATACGGCTATTTCCCATATGCTGTAGTTGTCTGCACTCCACCCCATATCCCGCCCACCTGTGCAAAGACTCCTCTGCCCTTACTTGTCCAATTTCGACGCAGGGAAAACTGTTGCTCCATAAGGGAACACCCACTGTGTACAAAGAGCTTTCAAATGACAACTTCCTTTACCTGCACTATGGAGCTGTGTGTCTGAAGCTTTTTGCCTGCAATAAAAAAAGGCATATTCTTTGTTCAAAAGAAGACCGGAGCTGTAAAACTGGTGCCTGGAGAAGTGATTTGCTCACTATCACATCATCTCCAGCTCACACTGTGAACTACCTGCTTCTGTTCCTTCAAGACCCCCTTTCACAAAGGTCCCCCGCTGCAGGTGTGGTTTTGTTCCAGGCCATCGGTACACTGACCTCGTCCTGTCTGCAGAGCATCTGTACGGATTCTCCCAATTTGTCCATGAGATCTATAGGTTTCACCAATGACACGGATTCTTGCCGCAGCAGTACGCTCTTACACTGGAACTTCTTTCTGGCTGGCAACTACATCAGTGTGGGCCACTGTCAGAAGCCCGTTGAAACGACAGCTACGAAAGCAAACAAAACCATAGGCCCCATTCATCATCATCATCTCCTGACAGTGGTTACAGACTCCCTGCAGCCTGTCAGACACTCACACATTGATTACTCACCGGGCTCCGTGACACTTCCTGTTAGGACACATTTTATTTCCTGCTAGGACATATACTTTGATTTACACTGTACGTCACACATCATTGCACACAACATATTTACACAATATTGAGTGTAAGGCTCTCTACACAGATTGTGCAAGTTGGGAAAAAAACTGTTTTTGGTTGCTCTTCATGAGTTGTTTTTATTCAAATCTAAAGATTTTGAGCTGATGCATTCAGATGCCTTCTCTTATTATCCAATAGAGGGCAGAATTAGTCCTTTTGTGGTCTTAATGTTATGTTCAGAATGGCCCACTATCATACTACTCTTACTATTTCTGCACTATTCACTACGTACTGTAGTGCATATTATGTGAAATTTATGCATATAGAATATGACCTACTGCATTTGCCAAAATGTGTAGTGTACGGACAGAGCACTGCTTGGGATACTGTTTCCCACAATGCACTACATGTACTCAGCTTGACCTTCCATTCCAGCACAATGAATGAACTGGGTGTTTTCTTGACTCTTTATTTGAATGTTAAAAATGTAATGTAATTGTTTTTTTTTCCCTTCAATATTACATGAACTTACATGGCTCGCTGAATTCAACATGCGGTGTAACAAAGTTGCATAATACTGTTTTACACTTTTTTTTTTTTACATTTGCACA

Function

NR:

description
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_06413155_06428371.mRNA False 2017 mRNA 0.39 4 6412512 6428983

Neighbor

gene id symbol gene type direction distance location
CI01000050_06343875_06352994 MTHFR coding upstream 58271 6343319 ~ 6354241 (+)
CI01000050_06311242_06312395 NPPA coding upstream 99082 6311171 ~ 6313430 (+)
CI01000050_06307476_06308324 NA coding upstream 103816 6307476 ~ 6308696 (+)
CI01000050_06302230_06302696 NA coding upstream 109748 6301735 ~ 6302764 (+)
CI01000050_06269145_06275358 NA coding upstream 137154 6269145 ~ 6275358 (+)
CI01000050_06495478_06497593 NA coding downstream 66256 6495239 ~ 6497733 (+)
CI01000050_06518156_06558229 PLCH2 coding downstream 88471 6517454 ~ 6558818 (+)
CI01000050_06593242_06603104 NA coding downstream 164259 6593242 ~ 6603608 (+)
CI01000050_06610618_06631765 DPP9 coding downstream 181635 6610618 ~ 6631770 (+)
CI01000050_06683472_06696145 PPIH coding downstream 254033 6683016 ~ 6696569 (+)
G215702 NA non-coding upstream 53682 6358573 ~ 6358830 (+)
G215728 NA non-coding upstream 133047 6279229 ~ 6279465 (+)
G215722 NA non-coding upstream 140128 6272147 ~ 6272384 (+)
G215667 NA non-coding upstream 239625 6171014 ~ 6172887 (+)
CI01000050_06086847_06251892 PRDM16 non-coding upstream 271064 6086847 ~ 6251892 (+)
G215774 NA non-coding downstream 277027 6706010 ~ 6707922 (+)
G216552 NA non-coding downstream 378784 6807767 ~ 6808079 (+)
G216571 NA non-coding downstream 512055 6941038 ~ 6952420 (+)
CI01000050_06966299_06980426 NA non-coding downstream 532291 6964336 ~ 6980623 (+)
G216612 NA non-coding downstream 644736 7073719 ~ 7074023 (+)
G215539 NA other upstream 781309 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 1002864 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 1819463 4589926 ~ 4593049 (+)
G214717 NA other upstream 2304232 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 2455468 3931890 ~ 3957044 (+)
G215773 NA other downstream 232205 6661188 ~ 6665703 (+)

Expression


Co-expression Network