CI01000050_06311242_06312395 (NPPA)


Basic Information

Item Value
gene id CI01000050_06311242_06312395
gene name NPPA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 6311171 ~ 6313430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_06311242_06312395.mRNA
CCATATATAACAGCGAAGCAGGCAGACGGCCAGTTCAGAGGGAAAGAAACAGCATCCAGAGGAACCCAGAGATGATCAGAGGACTAATTCTTACAGGACTACTGGTCCTGGTTTGGCACCAGATGGATGTACAAGCGCATACGTTGAGCAGACACAGTTCTGCCACCAACATGGCCAAGCTGAAGAGCTTGTTGCAGCAGTTTGAGGAGGCCCTGACCGCAGAAGAAGCTTCCGAGAGAGCCGTAGATTATGAAGACAGCAAAACCGTGCAGGAGCAGAGCCCCGCTTCCACATTCTGGGACAGAGACAGAGAGGAAGAAGCACCTCCAGCGGAGGACACCAACCCCCCAGATGGATTTGAGACACAGAGAAATCGCCTTATAGATCTTCTCATGTCAACCCGGAGCAAAAGCCTGTCTGGCTGTTTTGGGGGAAGGCTGGATCGCATAGGGTCATCCAGCTCCCTTGGGTGCAACTCTAAAAAAGGTTAGCTAAGATGAGTGAATTCAGTGACGTTAAAATTACAATATATTTTTATGGTATATAAATTATTTTACATGTGGATAGTTGTCCATGAACTTTTTTTCATTCAAAATTAGGATTTTAGATTAAAATTTACATATATTTAAAAAGGGGAAAGTACATCTAAATCTAAGGTCCTGTAACTGTCACTTATCAACTTAGATAATTAATGTGGTTCAGATAATATAATATTTTGAGTTTCTGATGATTGAACCAATTGCCTTCATTGTATTAACTTAAATTTTTAATTTCAATGAACTTAAAATTTTAAGGCAACCAGGTAACTTACTTTTTTAAGTTAAACCAACAATTCTTTTTTAAAGTGTTACTCGTAATTTGCTAGCCAGGACATTTTCTGTTGTTTATGCACATTTCCTTTAACCCTAAAGCACAACACAACACAATGCAATGGGCAATTCAAAATATGGGTAACACTTGTGAAAAATTAAAACGGAAAAGTTCATATTAACACAGTGACCTGACCTTTCTTAGAGTGCAGTCTCTCATATAAATATGAGCTCATAAAAACTGTAATTAGTAATTATAGTTAACATCTGTAGAAGGAGTAGAAAACAGGGAAATGAAAGCAAAATGTTACAAAATGTATGTTAAACTGAAACTGTGTGAAAATTGTGTTTAAATCTCGAGTTATTTAAACAAGAAAACTAATGTAAAATGTGGAAATTAAACCAACAAGACTTTGTTACAAAACACTTCCATATTTTGCAATCCCTGTATTGTCATCTGCTTTATATTATCTCATGGTTCATATTTGTTTGATATATTTATTATTATGTACAAGTAGTTGAGTGCTAATAGGAATGTTGAAATACATACAGTATATGACATAATTATGTGTATTTACTTAATCTGCATTCATTTATGAGGTTTATGAGATTTTAATACTCCTGCTGGTGTTCAGTTCTGCTGGGCTTTATCTAAGTAGCACTTCTGTTATTCTTTTTGTGTGTCACACATTTCTACAGCTGAAACTGTACTTAGAA

Function

symbol description
nppa Predicted to enable hormone activity and hormone receptor binding activity. Acts upstream of or within atrioventricular canal development; cardiac jelly development; and cardiac muscle cell proliferation. Predicted to be located in extracellular region. Predicted to be active in cytoplasm; extracellular space; and nucleus. Is expressed in heart rudiment; pericardial region; and skeletal muscle cell. Human ortholog(s) of this gene implicated in artery disease (multiple); congestive heart failure; heart conduction disease (multiple); and peritonitis. Orthologous to human NPPA (natriuretic peptide A).

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG:

id description
K12334 NPPA; natriuretic peptide A

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_06311242_06312395.mRNA True 1526 mRNA 0.36 2 6311171 6313430

Neighbor

gene id symbol gene type direction distance location
CI01000050_06307476_06308324 NA coding upstream 2475 6307476 ~ 6308696 (+)
CI01000050_06302230_06302696 NA coding upstream 8407 6301735 ~ 6302764 (+)
CI01000050_06269145_06275358 NA coding upstream 35813 6269145 ~ 6275358 (+)
CI01000050_06261124_06264271 NA coding upstream 46341 6261124 ~ 6264830 (+)
CI01000050_06086847_06251892 PRDM16 coding upstream 59279 6086847 ~ 6251892 (+)
CI01000050_06343875_06352994 MTHFR coding downstream 29889 6343319 ~ 6354241 (+)
CI01000050_06413155_06428371 NA coding downstream 99082 6412512 ~ 6428983 (+)
CI01000050_06495478_06497593 NA coding downstream 181809 6495239 ~ 6497733 (+)
CI01000050_06518156_06558229 PLCH2 coding downstream 204024 6517454 ~ 6558818 (+)
CI01000050_06593242_06603104 NA coding downstream 279812 6593242 ~ 6603608 (+)
G215728 NA non-coding upstream 31706 6279229 ~ 6279465 (+)
G215722 NA non-coding upstream 38787 6272147 ~ 6272384 (+)
G215667 NA non-coding upstream 138284 6171014 ~ 6172887 (+)
G215687 NA non-coding upstream 337625 5973320 ~ 5973546 (+)
G215702 NA non-coding downstream 45143 6358573 ~ 6358830 (+)
G215774 NA non-coding downstream 392580 6706010 ~ 6707922 (+)
G216552 NA non-coding downstream 494337 6807767 ~ 6808079 (+)
G216571 NA non-coding downstream 627608 6941038 ~ 6952420 (+)
G215539 NA other upstream 679968 5629610 ~ 5631203 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 901523 5407585 ~ 5409417 (+)
CI01000050_04591548_04592778 NA other upstream 1718122 4589926 ~ 4593049 (+)
G214717 NA other upstream 2202891 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 2354127 3931890 ~ 3957044 (+)
G215773 NA other downstream 347758 6661188 ~ 6665703 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035999 nppa coding NC_007119.7 CM002892.2 48613040 ~ 48617664 (+)