AMCG00021254


Basic Information

Item Value
gene id AMCG00021254
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 12106314 ~ 12107507 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021254
ATGAGTGCAGTCTGTGGGACTCCCCTCTATATGGCTCCAGAGGTACTGTTGCGGGAGCTGTACACCCGCGCTGTTGATTGGTGGGCACTGGGCGTGATCACTTTTGAAATGCTGGTTGGCGAGCCTCCTTTCTTTGGTGAAGGTGTACAGGAGGTGGTTGACAATATCGTTAACCAAGAAGTACAGTACCCCAAGTTCCTGTCTGCAGAAGCTTACTCCCGGAACACTCTACCGGACCCCTCGCCCCATCAAATCTCCAGCCGGCTCCTCTCCTTCTGCTGCGCTATGCAATCCAACACCTGCCCGCACGAGCAAGACAAATGCCCCGCTCTAGAGCATCACACAGTGATATTGCGGAGGGGGAAATTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021254 True 372 mRNA 0.54 3 12106314 12107507

Neighbor

gene id symbol gene type direction distance location
AMCG00021244 NA coding upstream 258843 11844509 ~ 11847471 (+)
AMCG00021245 NA coding upstream 286744 11792238 ~ 11819570 (+)
AMCG00021247 NA coding upstream 575843 10993784 ~ 11530471 (+)
AMCG00021235 NA coding upstream 1683910 10382430 ~ 10422404 (+)
AMCG00021232 fgf16 coding upstream 1750331 10344129 ~ 10355983 (+)
AMCG00021248 NA coding downstream 23688 12131195 ~ 12143466 (+)
AMCG00021255 NA coding downstream 78502 12186009 ~ 12195780 (+)
AMCG00021256 NA coding downstream 334708 12442215 ~ 12449758 (+)
AMCG00021262 LOC101466695,LOC100711741,LOC108231179,LOC106514543,LOC106949970,LOC106920031 coding downstream 1250751 13358258 ~ 13377435 (+)
AMCG00021264 NA coding downstream 1295127 13402634 ~ 13407007 (+)
G84759 NA non-coding upstream 4971 12101131 ~ 12101343 (+)
G84691 NA non-coding upstream 402314 11703795 ~ 11704000 (+)
G84690 NA non-coding upstream 414608 11691092 ~ 11691706 (+)
G84681 NA non-coding upstream 661164 11444831 ~ 11445150 (+)
G84668 NA non-coding upstream 936421 11169694 ~ 11169893 (+)
G84801 NA non-coding downstream 229295 12336802 ~ 12337139 (+)
G84803 NA non-coding downstream 230490 12337997 ~ 12338207 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding downstream 693322 12800829 ~ 12839209 (+)
G84837 NA non-coding downstream 948675 13056182 ~ 13061763 (+)
G84923 NA non-coding downstream 1464264 13571771 ~ 13572447 (+)
G84749 NA other upstream 5607 12075345 ~ 12100707 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 1119140 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 1386987 10470063 ~ 10719327 (+)
G84425 NA other upstream 2682895 9416267 ~ 9423419 (+)
G84301 NA other upstream 3472904 8631727 ~ 8633410 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 1327800 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 1908626 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 1961823 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 3320970 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 3955992 16063499 ~ 16073621 (+)

Expression


Co-expression Network