G84759


Basic Information

Item Value
gene id G84759
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 12101131 ~ 12101343 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU105738
aaaaaaaaaaaagcacatgtacataagtattcacagcctttgctcaatactttgttgaagcacctttggcaccaattacagcctcaagtctttttgagtatgatgctacaagcttggcacacctatttttgggcagtttctcccattcttctttgcaggacctctcaagctccatcaggttggatggggagcattggtgcacagccattttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105738 True 213 lncRNA 0.42 1 12101131 12101343

Neighbor

gene id symbol gene type direction distance location
AMCG00021244 NA coding upstream 253660 11844509 ~ 11847471 (+)
AMCG00021245 NA coding upstream 281561 11792238 ~ 11819570 (+)
AMCG00021247 NA coding upstream 570660 10993784 ~ 11530471 (+)
AMCG00021235 NA coding upstream 1678727 10382430 ~ 10422404 (+)
AMCG00021232 fgf16 coding upstream 1745148 10344129 ~ 10355983 (+)
AMCG00021254 NA coding downstream 4971 12106314 ~ 12107507 (+)
AMCG00021248 NA coding downstream 29852 12131195 ~ 12143466 (+)
AMCG00021255 NA coding downstream 84666 12186009 ~ 12195780 (+)
AMCG00021256 NA coding downstream 340872 12442215 ~ 12449758 (+)
AMCG00021262 LOC101466695,LOC100711741,LOC108231179,LOC106514543,LOC106949970,LOC106920031 coding downstream 1256915 13358258 ~ 13377435 (+)
G84691 NA non-coding upstream 397131 11703795 ~ 11704000 (+)
G84690 NA non-coding upstream 409425 11691092 ~ 11691706 (+)
G84681 NA non-coding upstream 655981 11444831 ~ 11445150 (+)
G84668 NA non-coding upstream 931238 11169694 ~ 11169893 (+)
G84666 NA non-coding upstream 949693 11151176 ~ 11151438 (+)
G84801 NA non-coding downstream 235459 12336802 ~ 12337139 (+)
G84803 NA non-coding downstream 236654 12337997 ~ 12338207 (+)
G84825 LOC107690093,LOC107593228,LOC107740173,LOC107680956,LOC107554828 non-coding downstream 699486 12800829 ~ 12839209 (+)
G84837 NA non-coding downstream 954839 13056182 ~ 13061763 (+)
G84923 NA non-coding downstream 1470428 13571771 ~ 13572447 (+)
G84749 NA other upstream 424 12075345 ~ 12100707 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 1113957 10963148 ~ 10987174 (+)
AMCG00021240 LOC107742636 other upstream 1381804 10470063 ~ 10719327 (+)
G84425 NA other upstream 2677712 9416267 ~ 9423419 (+)
G84301 NA other upstream 3467721 8631727 ~ 8633410 (+)
AMCG00021267 timm8a,LOC107593201 other downstream 1333964 13435307 ~ 13437408 (+)
AMCG00021296 NA other downstream 1914790 14016133 ~ 14033557 (+)
AMCG00021292 NA other downstream 1967987 14069330 ~ 14073125 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 3327134 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 3962156 16063499 ~ 16073621 (+)

Expression


Co-expression Network