AMCG00021339


Basic Information

Item Value
gene id AMCG00021339
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 15121710 ~ 15122963 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021339
ATGCCCTGGGATCCAGGTAGTTTGGGCTCCGTGGCGCCTTCCTCCCTGATCAACAGCATGGTGAAGATCGCCCTGATCTCTGTCATTGTGTGCACCTCCCTGTTTGGGAACGTGGTGGTGCTCCTGGTGTTCCAACGCAAGCCACAGCTGCTGCACGTGGCCAACCGCTTCGTCCTCAACTTGCTGCTGGCCGACCTGCTCCAGACTGTCCTGGTGATGCCCTTCGTGATCGCCACCACGGTGCCCCAAGTGTGGCCACTTGACTCCCGGCTCTGCCAGGCCCTTGTGGTCCTGATGCACCTCTTCGCCTTCGCGGGGGTGAACACCATCATCGTGGTGTCCGTGGACAGGTACCTGGCCATCATCCACCCACTCTCCTACCCCACCAGGATGACCCCTCATCTGGGCACCAACCTGATTGCCTTCACCTGGCTGTTGAGTGTCCTGCAAAGCACCCCACCCCTGTACGGCTGGGGGACCATCGATTTTGACCGGCGCCACAACTTCTGCACAGTGGTCTGGTCTTCCAGCTACTCTTACTCCACCCTGGTCTCCATGTTTTCCTTCTGGGTGCCTGTCTGCATCATGCTGGGCTGCTACTGGATGGTGTTCAGGGCTGCCAGGAGACAGAACGCCCTGGTTCACCCAGTGCATGCTGCAAACCACAACCAAACCTTTGGCTCCAGCAATGCCCCGAGCcaagggcagcagcagcagcagcctctgCCTGATGGCCCTTCCTCAGCAGCCTACCCCAGCAGAGTGCGGCACAGACGGTTCCACTACCACTGCAAGGCGGCCAAAGTGGTCTTCGTTATCATGTCCTCGTACATCTTCAGCATGGGTCCTTACAGTGTCCTCAGCACGGTCTCCATCAGCTCCAgtgcctcagtgcccccctggGTCACCTCCCTGGCTCTCATACTGTTCTTCTTCCAGTGCTGCATCCACCCCTACATCTACGGCTACATGCACCGGAGCGTGCGCAAGGAGTTCCTCGCGCTGCTCTGCGGTTCCTTCTGCAAGCAGGGGCAGCCACGCAGTTCAGGGGTGGACAGCTGCTTCACGGTGACCGATGGCCGGACTGTCCACTCACACTTCCCCAGCATGGCGGTGCGGATCTGCCCCCTGAGGACCTGGGAGGAAGGGACCACATCCTCCTCGCCCACCGAGAGGAGGTCCAAGGACAGCCGCAAGGAAACTACCTCCATCAGCTTCAGTTCTGAGAAGGAGCTCAACGTCCAAACCAAGTGA

Function

GO: NA

KEGG:

id description
K08423 GPR101; G protein-coupled receptor 101

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021339 True 1254 mRNA 0.60 1 15121710 15122963

Neighbor

gene id symbol gene type direction distance location
AMCG00021335 NA coding upstream 79632 15038966 ~ 15042078 (+)
AMCG00021333 fgf13,LOC107744562,LOC102775774 coding upstream 238622 14880963 ~ 14883088 (+)
AMCG00021334 fgf13a,fgf13,LOC107658011,LOC107601138 coding upstream 255131 14857234 ~ 14866579 (+)
AMCG00021330 NA coding upstream 390707 14696587 ~ 14731003 (+)
AMCG00021331 atp11c coding upstream 431591 14671252 ~ 14690119 (+)
AMCG00021337 rbmx coding downstream 27200 15150163 ~ 15154904 (+)
AMCG00021340 NA coding downstream 34220 15157183 ~ 15190091 (+)
AMCG00021348 NA coding downstream 202496 15325459 ~ 15335662 (+)
AMCG00021346 NA coding downstream 230793 15353756 ~ 15380123 (+)
AMCG00021350 mospd1,LOC107601124,LOC107560686,LOC107744569 coding downstream 345540 15468503 ~ 15474502 (+)
G85202 NA non-coding upstream 625861 14456628 ~ 14495849 (+)
G85185 dlg3 non-coding upstream 748153 14372720 ~ 14373557 (+)
G85098 slc25a5,LOC107378486,LOC104931197,LOC107748177,LOC105925769 non-coding upstream 969167 14109527 ~ 14152543 (+)
G85090 NA non-coding upstream 1086048 14034215 ~ 14035662 (+)
G85069 NA non-coding upstream 1119291 14000596 ~ 14002419 (+)
G85344 NA non-coding downstream 3804 15126767 ~ 15127233 (+)
G85345 NA non-coding downstream 4326 15127289 ~ 15127965 (+)
G85380 NA non-coding downstream 133485 15256448 ~ 15260965 (+)
G85381 NA non-coding downstream 134996 15257959 ~ 15259462 (+)
G85412 NA non-coding downstream 282813 15405776 ~ 15410610 (+)
AMCG00021292 NA other upstream 1048585 14069330 ~ 14073125 (+)
AMCG00021296 NA other upstream 1088153 14016133 ~ 14033557 (+)
AMCG00021267 timm8a,LOC107593201 other upstream 1684302 13435307 ~ 13437408 (+)
G84749 NA other upstream 3021003 12075345 ~ 12100707 (+)
G84657 slitrk2,LOC106611993,LOC106604961,LOC107688026,LOC107588360 other upstream 4134536 10963148 ~ 10987174 (+)
AMCG00021349 mmgt1,tmm32,LOC107658091,LOC107560676,LOC102787804 other downstream 305514 15428477 ~ 15432364 (+)
AMCG00021373 ubl3b,LOC107658069,LOC107707244,LOC108432919,LOC101472018,LOC107092570,LOC105029324,LOC100692344,LOC103390851 other downstream 940536 16063499 ~ 16073621 (+)
G85764 LOC103366846,LOC106930986 other downstream 1467218 16590181 ~ 16592973 (+)
G85787 NA other downstream 1533681 16656644 ~ 16714038 (+)
G85869 NA other downstream 1874914 16997877 ~ 17004131 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_007964 gpr101 coding NC_007125.7 CM002898.2 31890001 ~ 31893996 (-)