G169989


Basic Information

Item Value
gene id G169989
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035915.1
NCBI id CM008318.1
chromosome length 35429340
location 24647546 ~ 24647894 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU230170
cattgaggtgtaataggaggaatagcggtgctctcgtgtctgtgccggagctcctctgagctcaaaccagactctgtaagttttccgaggcagccgcgaccaacgctcgcgagaactgcgacctgctttccgacctttagttctaacagttctacaaggactactggttcattctttacaaactaacatacagacactctggcagaagctggaaagagacagaatatgtctgtgaaagccagaaaacgagaaagagaaactaatccgcctgaaacatttattacactctacaactgtagggggagcccacgagcacaaaatctcaatcctacctagtggagctttaatg

Function

NR:

description
PREDICTED: serine/threonine-protein kinase pim-3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230170 True 349 lncRNA 0.47 1 24647546 24647894

Neighbor

gene id symbol gene type direction distance location
arhgap15 arhgap15 coding downstream 448589 24110733 ~ 24198957 (-)
LOC103024947 LOC108266290,LOC108435066,LOC107714355,LOC107601612,LOC107657493 coding downstream 1080701 23095230 ~ 23566845 (-)
LOC103024627 ttn,LOC108435065,LOC107657509,LOC107714399 coding downstream 1182030 23313716 ~ 23465516 (-)
LOC111194931 ttnb,LOC108435066,LOC107714355,LOC107601612,LOC107716993 coding downstream 1347510 23241340 ~ 23300036 (-)
LOC103024581 NA coding downstream 2088164 22512903 ~ 22559382 (-)
LOC111188175 NA coding upstream 829033 25476927 ~ 25489657 (-)
LOC111194961 NA coding upstream 843467 25491361 ~ 25495739 (-)
LOC103035913 LOC108430488,LOC108266232 coding upstream 1037173 25685067 ~ 25720774 (-)
LOC103035604 NA coding upstream 1083920 25731814 ~ 25754591 (-)
LOC111194933 NA coding upstream 1126432 25774326 ~ 25781001 (-)
G169987 NA non-coding downstream 36216 24611038 ~ 24611330 (-)
G169976 NA non-coding downstream 287245 24278083 ~ 24360301 (-)
G169963 NA non-coding downstream 510479 24106465 ~ 24137067 (-)
G169900 NA non-coding downstream 742887 23904451 ~ 23904659 (-)
G169895 NA non-coding downstream 920243 23726925 ~ 23727303 (-)
G169997 NA non-coding upstream 117836 24765730 ~ 24766240 (-)
G169999 NA non-coding upstream 123072 24770966 ~ 24771170 (-)
G170004 NA non-coding upstream 235132 24883026 ~ 24883288 (-)
G170009 NA non-coding upstream 255561 24903455 ~ 24903676 (-)
G170013 NA non-coding upstream 273648 24921542 ~ 24924642 (-)
G169980 arglu1a,arglu1,LOC107555859,LOC108438027,LOC107673121,LOC107675355 other downstream 294638 24307650 ~ 24352908 (-)
G169567 NA other downstream 1752114 22894768 ~ 22895432 (-)
man1a2 man1a2,LOC107668846,LOC107658234,LOC107724469 other downstream 2171274 22338439 ~ 22476272 (-)
G169286 NA other downstream 2824508 21822713 ~ 21823038 (-)
cryl1 cryl1,LOC107712274,LOC107668879 other downstream 2981423 21648617 ~ 21666123 (-)
LOC111194864 NA other upstream 854046 25501940 ~ 25509416 (-)
LOC103030841 uggt2,LOC108430493,LOC108266228,LOC107600415,LOC107663813,LOC107555197 other upstream 1150616 25798510 ~ 25905616 (-)
LOC103029246 LOC108430494,LOC108266255,LOC107551943,LOC107663912,LOC107733654,LOC107738526 other upstream 1578563 26226457 ~ 26252266 (-)
LOC111194963 NA other upstream 3252297 27900191 ~ 27902899 (-)
G170854 NA other upstream 4038156 28686050 ~ 28687679 (-)

Expression


Co-expression Network