G810 (csnk1g2)


Basic Information

Item Value
gene id G810
gene name csnk1g2
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 2598846 ~ 2601377 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU1094
tgctttaTCTCTGCTGGGCTGAAGCGGTGTGTCACTGGGAATGGGTCCTATTGGTGTTGGCAGAGTTTTGCCGACCCAGTCATACTCGTAATCGAAGACGTAGCCATTTCTGTCAAAAAGGTCCGTGAAGAGTTTGCGTAAATAATCATAATCCGGTTTCTCAAAGAAGTCCAGTCTTCTCACATAACGCAGGTAGGTGGCCATTTCTGGGAAGCTTTCACACAGCACTTCAATGGGAG

Function

symbol description
csnk1g2 Enables protein serine/threonine kinase activity. Involved in peptidyl-serine phosphorylation. Located in membrane.

NR:

description
PREDICTED: casein kinase I isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1094 True 239 lncRNA 0.48 3 2598846 2601377

Neighbor

gene id symbol gene type direction distance location
LOC111193163 NA coding downstream 56505 2539816 ~ 2542341 (-)
LOC103037050 LOC108432507 coding downstream 176205 2405363 ~ 2422641 (-)
LOC103036044 LOC108432506 coding downstream 203481 2376247 ~ 2395365 (-)
LOC103037376 NA coding downstream 225891 2324606 ~ 2372955 (-)
LOC103036651 LOC103036651,LOC108432502,LOC105899541,LOC105028795,LOC108278136,LOC107718120 coding downstream 486687 2103470 ~ 2112159 (-)
LOC103035527 prrx1,prrx1a,LOC108444493,LOC107693734,LOC107722649 coding upstream 98981 2700358 ~ 2718035 (-)
fam129a NA coding upstream 233935 2835312 ~ 2892356 (-)
LOC103032964 LOC108444491,LOC107722586,LOC107718136,LOC107693739,LOC107589867 coding upstream 315412 2916789 ~ 2928066 (-)
LOC103034573 pla2g4a,LOC107718137,LOC107677770,LOC107693742,LOC107722605,LOC107589895,LOC107594671 coding upstream 384956 2986333 ~ 3036834 (-)
c1h1orf27 cunh1orf27,LOC103031066 coding upstream 498469 3099846 ~ 3114769 (-)
G806 LOC108432510 non-coding downstream 72650 2523317 ~ 2526196 (-)
G782 LOC108432509 non-coding downstream 105003 2491615 ~ 2493843 (-)
G780 NA non-coding downstream 111681 2481385 ~ 2487165 (-)
G748 NA non-coding downstream 195529 2400655 ~ 2403317 (-)
G750 NA non-coding downstream 198420 2398073 ~ 2400426 (-)
G822 NA non-coding upstream 5728 2607105 ~ 2607722 (-)
G824 NA non-coding upstream 11964 2613341 ~ 2613813 (-)
G825 NA non-coding upstream 14706 2616083 ~ 2649987 (-)
G838 NA non-coding upstream 43885 2645262 ~ 2649013 (-)
G850 NA non-coding upstream 146671 2748048 ~ 2748280 (-)
znf414 NA other downstream 164445 2423713 ~ 2434401 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other downstream 670591 1920480 ~ 1928255 (-)
yipf1 yipf1 other downstream 725719 1864515 ~ 1873127 (-)
LOC111197534 NA other downstream 1742686 855579 ~ 856160 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other downstream 1928131 589669 ~ 670715 (-)
LOC103032016 arpc5b,arpc5,LOC103032016,LOC108431159,LOC104921830,LOC107698380,LOC107599090,LOC103045524 other upstream 309377 2910754 ~ 2970340 (-)
LOC103029371 agl,LOC108441576,LOC107722579 other upstream 792827 3394204 ~ 3445386 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other upstream 1280993 3882370 ~ 3909671 (-)
G1308 NA other upstream 1498388 4099765 ~ 4101566 (-)
LOC111193794 LOC108442858 other upstream 1665624 4267001 ~ 4271970 (-)

Expression


Co-expression Network