LOC103037376


Basic Information

Item Value
gene id LOC103037376
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 2324606 ~ 2372955 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672202.1
AACCACATCTCTCTAGAACCCCCTTTGGAGTTTGGaggttctccagcaccaggtTGGTTCTTGAGGCCTGAAGGCTGTTGGCATTAAGGTGTTTTTATTGGATCTCTACTGACATTATTCATCATCTCACTGGTGGAGGTGATAAAGAGTCGTCCGCTCTTCTTCACTCCAGTTTTGCAACACCAGTTGGCACGCCAGAGCAAAGTCAAAGTGCCATAAAGAGACatacgtgtgtgtgtacgagGGGAATGACGCCCGTTTCCTTATTCCCAGCCTCGTTCTTGGAAGCTGCTGGCTGTGATTAGGTGCCATCCTCAGATACAGAGCCTCAGAGCTGATGGCTCTTCCTTAATGGAAATTCAAGGAGAACTTGAACTAATATGATGAACGTTTGCTAGTTTTATCTGTAAATTTGATgttcattataattattttgggttattatttgagttttatatatttttccaagGATAAATATTGACCACATCTTGTTCCGGTAGAGGAGGACTGTAGAAGGTGTCGTCTTGATGGTGGTGCTGAGTAAGGGGGATTATGTCTGGGTGGACTCCAGTATTGGGGTCCCGATCGGAGCCCGGGTTAAAGTCAcagatggagaagagctgcgtCTGCTTGATGATGAAGGGAAGgAGCTGCGTGTATCTGAGGTTCAGCGAGCCTCCATCAGACACATGCACCCCACCTCTGTGGAGGGAGTGGATGACATGATTAAACTGGGGGATCTGACTGAAGCTGGAGTCCTGAGGAACTTACTGGTCCGCCACAAACAGGGCATCATCTACACCTACATTGGCTCGGTTCTGGTGGCGGTGAACCCGTATCAGCTGCTGCCCATCTACACAGCGGAGCAGGTCCGGCTGTACCACGGGCGCAAGCTGGGAGAACTACCCCCCCACGTCTTCGCCATTGCAGACAAGTGCTACTACAACCTGCTGCGCAACCAGCGCAACCAGTGCTGCGTCATCAGTGGAGAGTCTGGAGCTGGAAAGACTGAGAGCACTAAGCTGATCCTGCAGTTTCTGGCAGCGGTGAGCGGTCAGCACTCATGGATTGAGCAGCAGATCCTGCAGGCCAACCCTGTTCTAGAAGCTTTCGGGAATGCTAAAACGACCCGTAATGATAACTCAAGCCGCTTCGGGAAATATGTGGAGATTTTCTTCAATAAAGACGGCATTATTGAAGGAGCTCACATTGAGCAGTACCTGCTGGAGAAGTCTCGCGTGTGCCACCAGGCCCCAATGGAAAGGAACTACCACATCTTCTACTGCCTTTTATCTGGGATGGCAAAGGAGCAGAAGAACATCCTGGCACTGGGGGACGCCACACAGTTCAACTACTTGACTGAGGGGGACTGCATCACGTGTGATGGGCAGGACGATGCAGATGAGTTTGGGCGGATCCGTACGGCTCTGAAGGTTCTGACCTTCACTGATCGGGAGAGCTGGGAGATATTCTGTTTACTGGCTGCTATTCTGCACCTGGGCAACATCAGCTTTGAAGCCGGTGTAGAAAATAACATGGAAAGCTGTGATGTGATGTCATCTGATCATTTCACAATCGCTGCCAAGTTATTGGAGGTTGATAAGTTGACTCTGGACTTGAGTCTTACTCATCGCTCTTTCGTAGCGAACCGTGAGCGACTGACGAAGCCCCTCAGCTCTGAGCAGGCCATCGACTGCAGGGACGCTCTGGCCAAGGCTATCTACAGCAGACTGTTTATgtggatttttgggaaaattaacaGCGCCAtccataaacacacagcagaaaaCTCCTACACCTACAAATCCATCGGTCTGCTCGACATTTTTGGCTTTGAGAATTTTGACAAGAACAGTTTTGAGCAGATGTGCATTAACTACGCTAACGAGCAGCTGCAGCAGTTCTTCGTGGAGCACATCTTTAAACTGGAGCAGGAGGAGTATCTGAAGGAGGGCATCAAATGGAAAAACATCAACTTTACAGACAACCAGCTCACCATCGACCTGCTGGCTGTAAAACCCCTCAACATCCTGTCACTGATCGACGAGGAGTCCCACTTCCCCAAGGGCACAGACAAAACACTGCTggacaaaattaaagaaaaccaCAAAAGAAGCAAAATCATGGTTCCCTCCAGAAACATCCACAGCATGCAGTTTGGTATTAAGCACTTTGCTGGAGTGGTCTTCTACGACTGCAGTGGGTTTCTGGAGAAGAACAGGGATGCCCTCAGTTTAGACATCATCAGCCTCATCCAGAAATCCTCCAGCAAACTTCTCCGACTGATCTTCCAGTCAGAGCTGAACGCCTCTGTATCCAGACCtgctaaaaacaacaacagcagagTCCTGGTCAACTCAAAACGCTCATTACAGCAGGGAAATGATCGGAGGCAGATCTCCACTCTGAGTGGTCAGTTCAGACACTCGCTGGACTCGCTGATGAaagctctttctctgtgtgagCCGTTCTTCATCCGCTGCTTCAAACCCAACGACAGCAAGCAGTCCAATgAGTTTGATAGGAAGCTGTGTATACAGCAGCTGAGATACTCCGGGTTGCTGGAGACCATCAAAATACGCAAGTTAGGATATCCCATCCGCCACAGATTCACAGAGTTCCTGGGTCGTTACCGAGTTTTGCTGAAGACCACAGACTGCGACCCAAACACAGAGCCTGCAGCAGACTGCTGTGATGCTATCTGCAGAGCGGTGATTAAGGATGAAGATGATTGGAGGATCGGCAAGACAAAAATCTTCCTAAGGgatTACCACGACTCCTTCctggagctggagagagagcgagagctgaACAGGAAAGCTCTTATCATCCAGAGAGTGTTGCTGGGCCACAGAGACAGGAAGacttttataaagaagaagagTGCAGCTCTGACGCTGCAGAAACACTGGCGAGGTCACAGAGATCGCAAACAGATAGAGAAACTCCTGCAGGGTTTTCTCCGGCTCCAGGCCACGGTGCACGGCCGGCAGGACGTCCTGCAGTTTCAGCGCACGCGGGGCGCTGTGGTCACCCTGCAATCACAAACTCGTGGTTTCCTGTCTAGGAAAGAGCTGAAGTGTAAACAGGCCGCTGTCATTGTGCTGCAGTCGCACACCAGAGGACTACTGGCCAGGAAACAAGTCCGGCGACTGAGGGATGATGCGGTCCTGTCCGCTCAGGAGAAAGAGGCTCAGGAACTGGCTGATCTGGAGCGGCAGAGGAGACTGGAGGAGgtgctcagccaatcacaggaGGAGGACACTAAAACTACTAAATCAGAGGCCAGCGATGAGGAAATTGAGGGCATCTTCGGGTTCCTGCCCAAAGTAGTTGGAGGACAGGAGGGTCCGGCGCCAGAGGGCTTTGAGgaTCTAGAAGGAGAACTGGTGGAGCTGAAGGAGGTGCAGCTCAATGAGAacaaggaggaagaggaggaggaggagaagaaggaggagaaggggAACATGGTGAAGATCGTGGTGACTCCAGCTGATGAGATTGTGTCGTCTGCATCACCGtcagagaaggaggaggaggaagaggaggaggaagaggaggaggaagaggaggaggatgatgaggaggatgaaTTTTCATTCTCTAAGTTTTCTGCTCTGCATTTCCAGGGCTcagctacacacactcacatcgaTCGAAGACTTCAGCAGCCTCTGATCCACCATGAGGACGAGGGAGACACACTGGCATGTGTGACAGTATGGTGGATCATACTGAGGTTTATGGGAGATATTCCTGAGCCTAAACAGGCTCGTCTGTCTGTGGTTGCTGATACTATCCAGAAGAATTTGGGCATGAGGCAAGCAAGGCGTCTCAGTAACCTGGTTGGAGTAGATGAGAAATTTCTGCGGAAAAAGGCCAAACAGCAGGgaaaagaaaatgggaaaagaaAACACTCAACAATTCCTGAGGAGtTAACAGTGGAACCCCCTGAGCTGGATTTCAGAGAGGAGGATGATGTTATGATTGGAGAGGGACCTACCTTTGATCGTCCAATGACACCTTTGGAAAAATTGCACACCATTGTAGGATATGCCATCGTCAAACCAGACATTAGAGATGAGATCTACTGTCAGATCTGCAAGCAGCTGACTAAAAACCCAAATCCAAAAAGCTGTAGCAGAGGCTGGGTCCTTCTGTCCATCTGCCTGGGCATCTTTCCTCCCACTGAGCTCTTCACAAAGtACCTGGAGAATTTTATCCGAAGGGGGCGGAGTGAATATTCTGCTAACTGTGCCGAACGCCTCCAGCGCACTTTAAGAAACGGGGAGAGAAATGAGCCACCGTGCTGGATCGAATTAAGGGCTGTGGAGAAGAACGAACACATGGTGGTGGTCGTGACCCTAATGGACGGCCAGACCCTCAGCCTGCCTGTAGACTCAGCCTGCACCTCAGCCGAGCTGTGCCAGTCCATCGCCCAGAAAACCAACCTGAAGGACACTTTCGGCTTCTCCCTCTACATTGCCCTCTACGAGAAGATATGGTCTCTGGGCTGTGGTGGAGAGCACATTTTGGACGCCATCTCTCAGTGTgagcaggaggagaggaggCAGGGCAGGGAGGAGCAGCACTCACCCTGGAGACTCTACATTCGCAAGGAGCTCTTCACCCCCTGGCACGACTGCACCACCGACCCCTTCAGCACGGAGCTTATCTACAGGCAGCTCATCCACGGCCTCAAGAATGGAGACTACCAGTCTGATAAGGAGGATGATTATGTGCAACTGGCAGCAAAGCACTATTACATCCAGTACGGCTCAGAGAGCAGCGTGGAGACTGCCAGGAAAGTAGTGCGGGAGTGTATGAGCCTGAGTCTGATAGAGAGCAAGTCTGAGGGCAAACTGGTTCAGCTGGTCAAGTCAGCCCATGCACAGGGAGTGTATGTAAACTCTAGGGACAGCGCTGATGCAGTGAAAGCGGACATGGTCGCTTATGCCCGTCTGAAGTGGCCGCTTTACTTTTCTAGATTCTTCGAGGCCTCTCAGATTTCAGGTCCTCCATTGCCAGAAGACCAGTTTGTGGTTGCTGTCAACTGGAGTGGTGTCTCCTTTCAGGCAGGAAAAGACAGAACGTTCCTGCAGCTCTCCTACCCTGAACTAACAGGAGTCCAGATACTCAGTGAGGGCAGGACAGGTGAGGTGGTGTGCATGTCCACTCTGAGGGGTGAGTATAAGCTGAAGGCAGTGAAGGCACACAGCATGGTAGAGCTGATCACTGTCTTCCTCGAGGGGTTAAAGGAACGCTCAGTCTATGCCATGACCATGCAGGACATCACCCGACAAGATGATGCAACATATTTGAGCTGTAAAAAGGGAGATCTTCTCTGCATTATTAATGATGGCGAGTACTCTAAAGACGGAGGCTGGATTAAAGGACAGAATGAAAGAACTGGCCAAAGCGGAGCCGTTTCTACAGATGCAATAATGATCCTGCCGACCCTGAGCCGACCCTCTGATGAAATACTGACTCTTTTGAGCCCAGGCCCAAAGAAATCTGTGCAGGTCAACCCAGTACTGAAGGATGAGGTGAACGTGGACAGAGTGGCTCTTGTTTCTCTCAAAGAGTATTCTACTGAGTTTTTCAGGGAGGCGAATAGAGATGCTGGCAAACATGGGAAAGGGGGCAAAGAGAAACTGTGGGCAAAAGCCAAAGAACCACTCAAACATCCACTACTAAAGAGTCTACAGAACAATTCAGAGCTCAGCCAGCTGGCCTGCCTGTGCTTTTCTGCTATCCTTAAATATATGGGTGACTACCCCATTAAGAACTTGCGCACCCCAATAGAGCTCACAGACCAGATATATGGTCCAGCCTTGGAGCATCCTGAACTGAGAGATGAGGTGTACTGTCAGATCATGAAGCAGATGACCAGCAACAACAACGGGATAAGTCTGGAGCGAGGCTGGCAGCTCTTATGGCTCTGCTGTGGGCTCTTTCCCCCGAGTCAGGGCTTACTAAAACATGCTCAGAAGTTCCTCAACTCTAGATCCAGAGAGCCGCTGTCTGCTGCCTGCCTGCAGAGGATGCAGGGCATGCTCAGtatTGAAGCCAGGAAATTTCCTCCTCACCAGGTTGAAGTAGACGCCATTCAGCAGAACAGCTCTCAGATCTTCCACAAAGTTCATTTCCCTAACGACACAAGAGAGatATTTGAGGTCACCACCACTACAAGGATCCGGGATCTCTGTCGCAACATCGCCAATTATCACTCGCTCTCGTCTGCGGACGGATACAGCCTCTTCGTCAAAACCGCTAACAAGGTAGTGGGCATGAATGAGCAGCAGTACTTTTTCGACAACCTGAAGCAGTACACAGATGCTCccaagaaaggaaagaaaagcaaAGAGGGAACTTCAGCAGTTCTTCCATATCTTGTTCTGTTCATGAGGAAGCTCTGGTTTAATGTGATGCCTGGGAAGGACATTACAGCTGACCTGGTCTTTCATTTCCCCCAGGAGCTGCCGAAGTATCTGCGTGGATACCACACTGTGTCTAAAGAGGAGATGGTAAACTTGGCCGGGCTGCTCTTCAGGGTGAAGGTGGACACTGACCGCTCTCAGTTCGTCATGATTCCTAAAATGCTGAAGGACTTGGTGCCAGCGGATCAGCTGAAGATCATGTCTTCTGATGACTGGAAGAAGCACATCATTAACGCTTACAACAAACAGGCCGGCATCACTGTGGACGAGGCTAAAGTCAGCTTTCTGAGGACGATCTCTGTATGGCCCACTTTCGGCTGTGCTTTCTTCGAAGTGAAGCAAACTTCCGAGCGCAGTTACCCCAGTATTATACAGATTGCAATCAGCAAACAAGGACTGACCCTCAGTGACCCTAAAAATAAGGAGGTGCTGGTGATGTATCCTTTCAGTAAAATCACCAACTGGTCCAGCGGCAACACTTACTTTCACATGACTATCGGCAGCCTAGTGAAGGGAAACACTCTGCTCTGTGAAACGTCCCTGgggTATAAAATAGACGACCTGCTGAACTCTTATGTGAACATGTATCTGGACGAGAGGACCAATGTGAGGCCCAGAAACCAGCTGCCGGACACCTCCAGAATTCAGTACAGACAGATGCCGTTCATATTTAACTGATGAGGTATTTCAGTCAGACTATAATATATCATTTAAAGACCTCCCATCCATCAGAAACCTTCAGAATGTCAGTAAATATTACAGGGTGTCTGAGGAACCTTTAAAATGGCTTTAATTAGTCATTAGGTCTTAAAAAAGCCACAGACAGTAAAAACAGACAGTCATTTTTTCACATTGCATTCAGCAGTTTCCACATTCCATATGCCATTATCTGGTTTGAGCTAGCAGAGACGGTACtctaattttacaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672202.1 True 7374 mRNA 0.50 47 2324606 2372955

Neighbor

gene id symbol gene type direction distance location
LOC103036651 LOC103036651,LOC108432502,LOC105899541,LOC105028795,LOC108278136,LOC107718120 coding downstream 212447 2103470 ~ 2112159 (-)
thap4 thap4 coding downstream 250963 2067978 ~ 2073643 (-)
LOC103039280 stk25b,LOC108432500,LOC107585675,LOC107722570,LOC108278137,LOC107693719,LOC107589848 coding downstream 272463 2038886 ~ 2052143 (-)
LOC103039590 LOC103039590 coding downstream 313428 2010269 ~ 2011178 (-)
LOC103039897 NA coding downstream 319434 1999100 ~ 2005172 (-)
LOC103036044 LOC108432506 coding upstream 3292 2376247 ~ 2395365 (-)
LOC103037050 LOC108432507 coding upstream 32408 2405363 ~ 2422641 (-)
LOC111193163 NA coding upstream 166861 2539816 ~ 2542341 (-)
LOC103035527 prrx1,prrx1a,LOC108444493,LOC107693734,LOC107722649 coding upstream 327403 2700358 ~ 2718035 (-)
fam129a NA coding upstream 462357 2835312 ~ 2892356 (-)
G696 NA non-coding downstream 72027 2250881 ~ 2252579 (-)
G694 NA non-coding downstream 77800 2239442 ~ 2246806 (-)
G671 NA non-coding downstream 98045 2145428 ~ 2226561 (-)
G684 NA non-coding downstream 131095 2186107 ~ 2193511 (-)
G655 NA non-coding downstream 223031 2096220 ~ 2101575 (-)
G750 NA non-coding upstream 25118 2398073 ~ 2400426 (-)
G748 NA non-coding upstream 27700 2400655 ~ 2403317 (-)
G780 NA non-coding upstream 108430 2481385 ~ 2487165 (-)
G782 LOC108432509 non-coding upstream 118660 2491615 ~ 2493843 (-)
G806 LOC108432510 non-coding upstream 150362 2523317 ~ 2526196 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other downstream 396351 1920480 ~ 1928255 (-)
yipf1 yipf1 other downstream 451479 1864515 ~ 1873127 (-)
LOC111197534 NA other downstream 1468446 855579 ~ 856160 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other downstream 1653891 589669 ~ 670715 (-)
znf414 NA other upstream 50758 2423713 ~ 2434401 (-)
G807 NA other upstream 177261 2550216 ~ 2600511 (-)
LOC103032016 arpc5b,arpc5,LOC103032016,LOC108431159,LOC104921830,LOC107698380,LOC107599090,LOC103045524 other upstream 537799 2910754 ~ 2970340 (-)
LOC103029371 agl,LOC108441576,LOC107722579 other upstream 1021249 3394204 ~ 3445386 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other upstream 1509415 3882370 ~ 3909671 (-)

Expression


Co-expression Network