G696


Basic Information

Item Value
gene id G696
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 2250881 ~ 2252579 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU904
ggggtgtccaaactacggcccgcgggtcatttgcggcccgtttccttttttggagcggcccatgaggtattttagaaatagaatgaaagttggcccgctgttaagcaggtttttataatgtgagattcaaagtttgaacgctaggtgtcagaaaccggccacagagtcggagagggtgcgcatttgtagcgcagaaaaacgggccaaagagtctaaaagcggagaggggtgcgcatttctagcgcagaaaaacgggccaaagagtctaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU904 True 272 lncRNA 0.42 3 2250881 2252579

Neighbor

gene id symbol gene type direction distance location
LOC103036651 LOC103036651,LOC108432502,LOC105899541,LOC105028795,LOC108278136,LOC107718120 coding downstream 138722 2103470 ~ 2112159 (-)
thap4 thap4 coding downstream 177238 2067978 ~ 2073643 (-)
LOC103039280 stk25b,LOC108432500,LOC107585675,LOC107722570,LOC108278137,LOC107693719,LOC107589848 coding downstream 198738 2038886 ~ 2052143 (-)
LOC103039590 LOC103039590 coding downstream 239703 2010269 ~ 2011178 (-)
LOC103039897 NA coding downstream 245709 1999100 ~ 2005172 (-)
LOC103037376 NA coding upstream 72027 2324606 ~ 2372955 (-)
LOC103036044 LOC108432506 coding upstream 123668 2376247 ~ 2395365 (-)
LOC103037050 LOC108432507 coding upstream 152784 2405363 ~ 2422641 (-)
LOC111193163 NA coding upstream 287237 2539816 ~ 2542341 (-)
LOC103035527 prrx1,prrx1a,LOC108444493,LOC107693734,LOC107722649 coding upstream 447779 2700358 ~ 2718035 (-)
G694 NA non-coding downstream 4075 2239442 ~ 2246806 (-)
G671 NA non-coding downstream 24320 2145428 ~ 2226561 (-)
G684 NA non-coding downstream 57370 2186107 ~ 2193511 (-)
G655 NA non-coding downstream 149306 2096220 ~ 2101575 (-)
G653 NA non-coding downstream 157889 2092423 ~ 2092992 (-)
G750 NA non-coding upstream 145494 2398073 ~ 2400426 (-)
G748 NA non-coding upstream 148076 2400655 ~ 2403317 (-)
G780 NA non-coding upstream 228806 2481385 ~ 2487165 (-)
G782 LOC108432509 non-coding upstream 239036 2491615 ~ 2493843 (-)
G806 LOC108432510 non-coding upstream 270738 2523317 ~ 2526196 (-)
gtf2b tf2b,gtf2b,LOC107585659,LOC107693714,LOC107718116,LOC107691461 other downstream 322626 1920480 ~ 1928255 (-)
yipf1 yipf1 other downstream 377754 1864515 ~ 1873127 (-)
LOC111197534 NA other downstream 1394721 855579 ~ 856160 (-)
LOC103037308 LOC108440474,LOC108278112,LOC107585786,LOC107669856,LOC107745208 other downstream 1580166 589669 ~ 670715 (-)
znf414 NA other upstream 171134 2423713 ~ 2434401 (-)
G807 NA other upstream 297637 2550216 ~ 2600511 (-)
LOC103032016 arpc5b,arpc5,LOC103032016,LOC108431159,LOC104921830,LOC107698380,LOC107599090,LOC103045524 other upstream 658175 2910754 ~ 2970340 (-)
LOC103029371 agl,LOC108441576,LOC107722579 other upstream 1141625 3394204 ~ 3445386 (-)
wdfy1 wdfy1,LOC106613124,LOC102785143,LOC103370589 other upstream 1629791 3882370 ~ 3909671 (-)

Expression


Co-expression Network