RNA id: XM_043259572.1


Basic Information

Item Value
RNA id XM_043259572.1
length 2742
RNA type mRNA
GC content 0.45
exon number 15
gene id coq8b
representative True

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 8963504 ~ 8972321 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCGGCTGTCAATCACCTCGTGCTTTTCAATTCCGTGTCCGGTAGCGGTTGCAAAATAAGTGGAGTGTGGAGTGGAAAGGACACTTCGCACAGACGCTGAGAAGAGTTTGGTCTTTCAGCAAAATGGTGTTGGCTGAAGTGCTCCAGGTGTTGAGGGGGGCTGGCAAGGTGGGCGCTGCCTTTGCCACCAATCAGGGTGAACAGCTCAGGATCATAGCCTGCAACTCGACCTTTGGTGCAGGGGTCAAAGCCGCGCAGGAGGCAGTTGAGGGCGTGATGGGCACTGTGATGGGAGCAGACGTGacGCCCAAGACTGAAGAATTCCCTGACATTGAGAAGTGGGAGGAGGTGGACCCAGATGAAGTAGCTAAATGGGCTGTGGGCTCTGAAATGCCACCAGAGTTTTCCAGCAAGGATGGAAGGGAGGAAACTTCAGAGATGCCTGTTGGTGCTCCTACTGGCACGGTCAAAAGAAATGGGTGGCCTGCTCAAAGCACTCAATTTTTGCATGCATCAGTGTCTCATCATCCTATTAGGTTTGTCCATGACTCGATGGTTGCCAGGTTAAGCCCTGAAGACATTAAAAAGGCAAGGGAGGCAAAACAGAATTTTACAAGACCCGTACGACAAAAGCTTAGTGAGCGAGCGAGAGAACGCAAAGTGCCCGCAACCCGAATAAGCCGACTGGCTAATTTTGGAGGATTAGCTTTCGGACTTGGCATCGGTGCTATTGCGGAGGTTGCGAAGCAGTCTTTTGAAGGAAAACGCTCAGATACGGGGGCTCTTTTAGACTCTCCCCTCCTGTCAGAGGCCAACGCAGAGAGAATTGTGGACACGCTGTGTAAAGTTAGAGGAGCGGCCCTCAAAATTGGACAGATGCTAAGCATTCAGGATAATAGCTTCATTAACCCACAACTGCAGAAAATATTTGAGAGGGTTCGACAGAGTGCAGACTTCATGCCAGCCTGGCAAATGCATAAAGTGCTTGAGGAGGAGTTAGGGTCTGAATGGAAGGAGAAACTCTCATCATTTGAGGAAAAACCCTTTGCCGCTGCCTCCATTGGTCAAGTGCATCATGGAGTCTTGCCTGATGGGAGGGAAATTGCTATGAAGATACAGTACCCTGGCGTTGCTGAGAGCATTCGTAGTGACATCAACAACCTCATGTCTGTTCTGAAGATGAGTGTTGTGCTGCCTGATGGTCTATTTGCTGACAGTAGTCTTGAAGTTCTACAGAAGGAACTGGCATGGGAGTGTGACTACAAGAGAGAGGCAGAATGTGCAAAGCGGTTTAGGGAGTTAGTTGAAGGTGATCCAGTATTCGTGGTCCCTGAGGTTTTTGATGAGCTGTCGTGTGGTCGTGTGATCTCTATGGAGCTGGTTCATGGAGTTCCACTGGACCGCTGTGTTGACTTGAATCAGGACACTAGAAATGAGATCTGTTTTAACATCCTGCAGTTGTGTTTGAGAGAGCTGTTTGAGTTCCGCTTCATGCAGACAGACCCGAACTGGTCCAACTTCTTCTATAACAAAGAACAGAACAAGATATATCTGTTGGACTTTGGAGCATGTCGAGACTACCCAGAGTCGTTCACTGATGATTACATCCAGGTGGTTCATGCAGCATCAGTCGGAGACAGGGCTACTGTTTTGCAGAAATCGAAAGATCTGAAGTTCCTTACCGGTTTCGAAGCCAAgGCCTTTGAGGACGCACACGTAGAGGCAGTCATGATCCTCGGCGAAGCGTTTGCTTCTACCGAAGCGTTTGACTTCGGCAGTCAGAGCACCACGCAGCGCATCCAGAGCCTGATCCCGGTCATGCTTCGACACCGTCTCACCCCTCCTCCAGAGGAGTCCTACTCTCTGCACCGCAAAATGGCTGGCTCCTTCCTCATCTGTTCCAAGCTGAAAGCCCGCTTTCCCTGCCGAAACATGTTCCTTGACGTTTACAATGCCTACCAAAGTAAGAGACGGGAAAGATGCGCCCAGATTTAGACTGGTGGAGTTTGGACTGTGGGAGATGGCACTACAACCAAGAGCGGCGTTTTCTTGTATGTGTCGTAGAAGTGAAtttgttgtatgttttatatgtgaTGTTCACTCAAGAACTCGATGTTAGATGTTGAACTTCTGAGAgacattgtttatttgtaaatctGCAAATTCAGTTCAAATGTTTCATAATTCTATATGTCCAACAttgtttatactttttttttttttttttaaatttaagtttaaacaACGACAAACACGGCAAAATGCTCTCAAACtttatcacacacactctgaggGAAAAGGTGTATATATGTAGGATTTGCTCAAAAATCAGTGTTACGATTATTGCCAagcttttaaaattaatattaaacgaTCAACAGAATTTCCTTCAGTGGCgtgaaatgcatttaacaatTGTAACAGTAGAGTTTTAGATGGGACAATTTGATTTGACATCATGTTGCTATTTATTTCACGTTAGGAAAGTCATTTTGTGCAATATGTCACTTTTCATCgttaaaagtatttaaacagTCACTGTAAACGGTGTTTATTATACTGACTAGAGTACGTAAAAAGAGCAATCATATTTAATCTAACATTAAATCAGAGCTTTCACCCAGATATTCTGCTTGCCTGTTTATTCAGCaatacgtatttatttatttttgaaatgctcGCAGTGTGAACTCCAATttttcatgtattcatttataaataaagccaaataattaaaatgca

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG:

id description
K08869 ADCK, ABC1; aarF domain-containing kinase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU154751 lncRNA downstream 234517 8716395 ~ 8728987 (-) True G104809
TU154755 lncRNA downstream 261462 8595677 ~ 8702042 (-) True G104812
TU154749 lncRNA downstream 285181 8586628 ~ 8678323 (-) True G104808
XR_006252678.1 lncRNA upstream 60278 9032599 ~ 9038328 (-) True LOC122359047
TU154923 lncRNA upstream 167737 9140058 ~ 9140422 (-) True G104922
TU154948 lncRNA upstream 262549 9234870 ~ 9235087 (-) True G104936
XR_006252658.1 lncRNA upstream 292174 9264495 ~ 9295511 (-) True LOC122358921
TU155006 lncRNA upstream 419712 9392033 ~ 9392240 (-) True G104975
XM_043259589.1 mRNA downstream 16089 8923331 ~ 8947415 (-) True numbl
XM_043259142.1 mRNA downstream 54198 8856568 ~ 8909306 (-) False dpf1
XM_043259143.1 mRNA downstream 54202 8856568 ~ 8909302 (-) False dpf1
XM_043259141.1 mRNA downstream 56198 8856568 ~ 8907306 (-) False dpf1
XM_043259140.1 mRNA downstream 56198 8856568 ~ 8907306 (-) True dpf1
XM_043258580.1 mRNA upstream 9159 8981480 ~ 8987688 (-) True slc5a2
XM_043258582.1 mRNA upstream 16001 8988322 ~ 8995214 (-) True si:dkey-260j18.2
XM_043259162.1 mRNA upstream 66575 9038896 ~ 9046115 (-) True LOC122359046
XM_043259838.1 mRNA upstream 265700 9238021 ~ 9248654 (-) True mfsd8l1
XM_043259304.1 mRNA upstream 277597 9249918 ~ 9251941 (-) True polr2h
XR_006252682.1 other downstream 912794 8044822 ~ 8050710 (-) False nipsnap2
TU154597 other downstream 1005273 7957836 ~ 7958231 (-) True G104695
TU154509 other downstream 1323165 7639644 ~ 7640339 (-) False G104628
TU154511 other downstream 1323165 7639644 ~ 7640339 (-) False G104628
TU154467 other downstream 1391414 7569846 ~ 7572090 (-) True G104603
unassigned_transcript_1962 other upstream 32098 9004419 ~ 9004492 (-) True trnat-agu_3
unassigned_transcript_1963 other upstream 38946 9011267 ~ 9011340 (-) True trnat-ugu_1
unassigned_transcript_1964 other upstream 39246 9011567 ~ 9011640 (-) True trnat-agu_4
unassigned_transcript_1965 other upstream 40477 9012798 ~ 9012871 (-) True trnat-cgu_2
unassigned_transcript_1966 other upstream 40772 9013093 ~ 9013166 (-) True trnat-agu_5

Expression Profile