RNA id: unassigned_transcript_2147



Basic Information


Item Value
RNA id unassigned_transcript_2147
length 74
RNA type tRNA
GC content 0.55
exon number 1
gene id trnat-agu_65
representative True

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 9395530 ~ 9395603 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGcgccgtggcttagttggttaaagcgcctgtctagtaaacaggagatcctgggtttgaatcccagcggtgcct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155007 lncRNA downstream 1322 9393877 ~ 9394208 (-) True G104976
TU155006 lncRNA downstream 3290 9392033 ~ 9392240 (-) True G104975
XR_006252658.1 lncRNA downstream 100019 9264495 ~ 9295511 (-) True LOC122358921
TU154948 lncRNA downstream 160443 9234870 ~ 9235087 (-) True G104936
TU154923 lncRNA downstream 255108 9140058 ~ 9140422 (-) True G104922
TU155099 lncRNA upstream 25486 9421089 ~ 9423926 (-) True G105020
TU155100 lncRNA upstream 25486 9421089 ~ 9423123 (-) False G105020
TU155098 lncRNA upstream 28627 9424230 ~ 9432131 (-) True G105019
TU155148 lncRNA upstream 143988 9539591 ~ 9540814 (-) False LOC122359087
XR_006252683.1 lncRNA upstream 144459 9540062 ~ 9541822 (-) True LOC122359087
XM_043258365.1 mRNA downstream 82074 9311086 ~ 9313456 (-) True nppc
XM_043259001.1 mRNA downstream 91657 9297101 ~ 9303873 (-) True ncl
XM_043259304.1 mRNA downstream 143589 9249918 ~ 9251941 (-) True polr2h
XM_043259838.1 mRNA downstream 146876 9238021 ~ 9248654 (-) True mfsd8l1
XM_043259162.1 mRNA downstream 349415 9038896 ~ 9046115 (-) True LOC122359046
XM_043259313.1 mRNA upstream 13243 9408846 ~ 9414948 (-) False p4ha3
XM_043259312.1 mRNA upstream 13243 9408846 ~ 9414948 (-) False p4ha3
XM_043259311.1 mRNA upstream 13243 9408846 ~ 9414948 (-) True p4ha3
XM_043259319.1 mRNA upstream 23464 9419067 ~ 9420570 (-) True or95a1
XM_043259320.1 mRNA upstream 23464 9419067 ~ 9420547 (-) False or95a1
unassigned_transcript_2146 other downstream 220 9395237 ~ 9395310 (-) True trnaa-ugc_117
unassigned_transcript_2145 other downstream 477 9394964 ~ 9395053 (-) True trnar-ucu_51
unassigned_transcript_2144 other downstream 849 9394608 ~ 9394681 (-) True trnat-agu_64
unassigned_transcript_2143 other downstream 1121 9394336 ~ 9394409 (-) True trnat-ugu_47
unassigned_transcript_2142 other downstream 1334 9394123 ~ 9394196 (-) True trnat-agu_63
TU155103 other upstream 38823 9434426 ~ 9436797 (-) True G105022
TU155104 other upstream 38823 9434426 ~ 9436797 (-) False G105022
TU155158 other upstream 157031 9552634 ~ 9555787 (-) True G105059
TU155454 other upstream 368268 9763871 ~ 9796890 (-) True dynll2a
TU155453 other upstream 398145 9793748 ~ 9796890 (-) False dynll2a