RNA id: TU184920


Basic Information

Item Value
RNA id TU184920
length 246
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G125253
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10054812 ~ 10055057 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tagttggaataggatctaatacacacgtggcagatttagactcGGCGATTAGTTTATTGAACTCTTCCTGTCGTacggttgcaaaacactgtaactgaattagCTGGGTACTGAGTAAGGCTGGACTAAAGGACAAAGTgaagggttgattttctgttattgtaAGTGTGATATAATCTATTTTcttagtgaagaattgtatgaagtcattgctacttaactgagagggtgtgcagcgttctattg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184887 lncRNA upstream 16884 9802919 ~ 10037928 (+) True G125240
TU184901 lncRNA upstream 16884 9803836 ~ 10037928 (+) False G125240
TU184908 lncRNA upstream 266709 9786260 ~ 9788103 (+) False G125243
TU184910 lncRNA upstream 266709 9786260 ~ 9788103 (+) False G125243
TU184906 lncRNA upstream 266857 9786837 ~ 9787955 (+) False G125243
TU184922 lncRNA downstream 2684 10057741 ~ 10062780 (+) True G125254
TU184924 lncRNA downstream 2684 10057741 ~ 10062780 (+) False G125254
XR_006246947.1 lncRNA downstream 78914 10133971 ~ 10135088 (+) True LOC122323099
TU185046 lncRNA downstream 193083 10248140 ~ 10249308 (+) True G125341
TU185050 lncRNA downstream 229581 10284638 ~ 10288340 (+) True G125344
XM_043264877.1 mRNA upstream 253241 9751257 ~ 9801571 (+) True LOC122363015
XM_043265107.1 mRNA upstream 305029 9744904 ~ 9749783 (+) True arpp19a
XM_043264262.1 mRNA upstream 315406 9709204 ~ 9739406 (+) True fam214a
XM_043264263.1 mRNA upstream 315406 9729301 ~ 9739406 (+) False fam214a
XM_043263915.1 mRNA upstream 352666 9696223 ~ 9702146 (+) False onecut1
XM_043264075.1 mRNA downstream 93018 10148075 ~ 10160926 (+) True LOC122362557
XM_043264076.1 mRNA downstream 104219 10159276 ~ 10160926 (+) False LOC122362557
XM_043264134.1 mRNA downstream 135713 10190770 ~ 10193160 (+) True LOC122362596
XM_043264594.1 mRNA downstream 141747 10196804 ~ 10209150 (+) True gnb5b
XM_043264595.1 mRNA downstream 154296 10209353 ~ 10214486 (+) True bcl2l10
TU184804 other upstream 689324 9359436 ~ 9365488 (+) True G125192
TU184604 other upstream 1517864 8176353 ~ 8536948 (+) True G125041
TU184436 other upstream 2876536 7177839 ~ 7178276 (+) True G124920
TU184430 other upstream 2881792 7172626 ~ 7173020 (+) True G124914
TU184395 other upstream 3027677 7026318 ~ 7027135 (+) True G124881
TU185257 other downstream 769917 10824974 ~ 10837276 (+) False G125461
TU185261 other downstream 769917 10824974 ~ 10837276 (+) True G125461
TU185314 other downstream 913028 10968085 ~ 10969767 (+) True G125496
XR_006253172.1 other downstream 1171058 11226115 ~ 11231714 (+) False ccnl1a
XR_006246968.1 other downstream 1179274 11234331 ~ 11237147 (+) False selenot1b

Expression Profile