RNA id: TU184924


Basic Information

Item Value
RNA id TU184924
length 386
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G125254
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10057741 ~ 10062780 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtcacggggcggatgaagcacagcacaaacagaggcgtttgaacccCGGAGGGcgcgtttatttaacaatatataggtgataggtgaatggtgagccggtgcacaaccgctgtcagtggcgttatcttctgggtgctcggtgctctgggtgcagtcggtgagtaCGGCAACGGTGATTCTTGggggaattagctccgtgtcgcggttcaaggactggcttctagaagatacaaaagagataacagtcagagacagcatgtaggagtgtcgtagctcactggagtgcgagcctgacgtggcttatctggccaccggcaaacgagctccaggtgcggcgagtccggtgattagtggctttcccaggtgatggtggtttattcccagg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU184920 lncRNA upstream 2684 10054812 ~ 10055057 (+) True G125253
TU184887 lncRNA upstream 19813 9802919 ~ 10037928 (+) True G125240
TU184901 lncRNA upstream 19813 9803836 ~ 10037928 (+) False G125240
TU184906 lncRNA upstream 269786 9786837 ~ 9787955 (+) False G125243
XR_006246947.1 lncRNA downstream 71191 10133971 ~ 10135088 (+) True LOC122323099
TU185046 lncRNA downstream 185360 10248140 ~ 10249308 (+) True G125341
TU185050 lncRNA downstream 221858 10284638 ~ 10288340 (+) True G125344
TU185056 lncRNA downstream 223947 10286727 ~ 10336979 (+) False G125347
TU185055 lncRNA downstream 245774 10308554 ~ 10341585 (+) True G125347
XM_043264877.1 mRNA upstream 256170 9751257 ~ 9801571 (+) True LOC122363015
XM_043265107.1 mRNA upstream 307958 9744904 ~ 9749783 (+) True arpp19a
XM_043264262.1 mRNA upstream 318335 9709204 ~ 9739406 (+) True fam214a
XM_043264263.1 mRNA upstream 318335 9729301 ~ 9739406 (+) False fam214a
XM_043263915.1 mRNA upstream 355595 9696223 ~ 9702146 (+) False onecut1
XM_043264075.1 mRNA downstream 85295 10148075 ~ 10160926 (+) True LOC122362557
XM_043264076.1 mRNA downstream 96496 10159276 ~ 10160926 (+) False LOC122362557
XM_043264134.1 mRNA downstream 127990 10190770 ~ 10193160 (+) True LOC122362596
XM_043264594.1 mRNA downstream 134024 10196804 ~ 10209150 (+) True gnb5b
XM_043264595.1 mRNA downstream 146573 10209353 ~ 10214486 (+) True bcl2l10
TU184804 other upstream 692253 9359436 ~ 9365488 (+) True G125192
TU184604 other upstream 1520793 8176353 ~ 8536948 (+) True G125041
TU184436 other upstream 2879465 7177839 ~ 7178276 (+) True G124920
TU184430 other upstream 2884721 7172626 ~ 7173020 (+) True G124914
TU184395 other upstream 3030606 7026318 ~ 7027135 (+) True G124881
TU185257 other downstream 762194 10824974 ~ 10837276 (+) False G125461
TU185261 other downstream 762194 10824974 ~ 10837276 (+) True G125461
TU185314 other downstream 905305 10968085 ~ 10969767 (+) True G125496
XR_006253172.1 other downstream 1163335 11226115 ~ 11231714 (+) False ccnl1a
XR_006246968.1 other downstream 1171551 11234331 ~ 11237147 (+) False selenot1b