RNA id: XM_043264595.1



Basic Information


Item Value
RNA id XM_043264595.1
length 1459
RNA type mRNA
GC content 0.42
exon number 3
gene id bcl2l10
representative True

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10209353 ~ 10214486 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGAAACGAGGGCGTGGCTTAGAGAGAAGGGGCGTCCTCTACGTTGATAAAGCGTGTGCAGCAGGGTGGAGTGACGTCTCCTATGAGATCTGACTGCTGTTTGCGCAACTGTCGGTGGAGAGCGCAGTCTGACATCGCTGGGAGGAAAATGTCCTGTTGGTTGAGGGAACAGACTTTGTTGCTGGCAGAAGATTACATCAGCTTCTGCAGCGGAATCCAACAGACGCCTCCCAGCGAGTCAGCAGAGGCCATGAGATACCTGGCCAAAGAGATGGAGCAGCAGCACAGAACCAAATTCCGATCCCTCTCCCAGGAGTTCCTGGACACCTGCGGATCAGATCCCAGCAAGTGTCTGCAGAGGGTCATGAGGGAACTAGTGGGAGATGGGAAACTGAACTGGGGAAGGGTGGTCTCCATCTTCACTTTTACTGGAGTGCTGGCCAGTGAGCTTCTGTCCAGAGGAGAGAAATCAGAGTGCCCCCGGAGACTGGCCGAGACCATCGCCGACTACCTTGGAGGGGAAAAACAGGATTGGCTGGTGGAAAACGGTGGCTGGGagggtttctgcaggtttttcCACAACGCAAGACAGCTGAACCAAGAGTCTTCGATGAAGACAGCACTGTTTGCAGCAGCAGGAGTGGGTTTAGCTGGTCTAACCTTTCTCTTAGTACGCTAATGATAATTATTAGGTTTTttcgctctctctttcacacacaacaCATCTGCTTTCTGTCATATAGCTATAAGTCAACAGTTCTGGTCTTTAggatttttgcacattttttttttccatgtccaCGCCTGTAGTTACAGCAAACAGTCATTCATGTTGATTGTACACTCTTCACATGGCCTTCAGgagaaaagaatgaaagttCTGGTTCTTTGCATATCTAACAtggtgctttttattttatagttgcTTTTGTCACTTGTTCCTGTGTAAATCATGTTAGTTTAGATAGTATTTCCAGTTTGTGAAAATGACAccagtttattgtttatttcagtcTGAAAACAAGATGCCCACTGATCGCAGTTGTCAGAAACCACTGTAATTGCATTagagacaaaatatatattttgtaatggaGCAATTCTCTGTTAGACCACTTTTTGCCTTGACTAGTGGTTTACATACGATAATTTTACACCTTTGGGATGTCTCTGCTTCATGCTGgaagtcatttgttttaaaggtgCTTGCTTGTTTGGTTCCAAACATCTCTGTGATATTTTGCCCATTGTAAGTTTACgctgtaaatttatttatttacctcttaagaacaaattattactatttaggCAATTCCCAACAATtgacaaaacattatatttttgcatttttatttattaacttcttaataaaataattttactgtgAAACCATTTTGTGTTGCATTGAAGTTTTTGTGttgtatgtaaattatataaatatgaactttgtttttgtttca

Function


GO:

id name namespace
GO:2001243 negative regulation of intrinsic apoptotic signaling pathway biological_process
GO:0001756 somitogenesis biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0051279 regulation of release of sequestered calcium ion into cytosol biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0007369 gastrulation biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006246947.1 lncRNA upstream 74265 10133971 ~ 10135088 (+) True LOC122323099
TU184922 lncRNA upstream 146573 10057741 ~ 10062780 (+) True G125254
TU184924 lncRNA upstream 146573 10057741 ~ 10062780 (+) False G125254
TU184920 lncRNA upstream 154296 10054812 ~ 10055057 (+) True G125253
TU184901 lncRNA upstream 171425 9803836 ~ 10037928 (+) False G125240
TU185046 lncRNA downstream 33654 10248140 ~ 10249308 (+) True G125341
TU185050 lncRNA downstream 70152 10284638 ~ 10288340 (+) True G125344
TU185056 lncRNA downstream 72241 10286727 ~ 10336979 (+) False G125347
TU185055 lncRNA downstream 94068 10308554 ~ 10341585 (+) True G125347
TU185062 lncRNA downstream 127281 10341767 ~ 10343454 (+) True G125352
XM_043264594.1 mRNA upstream 203 10196804 ~ 10209150 (+) True gnb5b
XM_043264134.1 mRNA upstream 16193 10190770 ~ 10193160 (+) True LOC122362596
XM_043264075.1 mRNA upstream 48427 10148075 ~ 10160926 (+) True LOC122362557
XM_043264076.1 mRNA upstream 48427 10159276 ~ 10160926 (+) False LOC122362557
XM_043264877.1 mRNA upstream 407782 9751257 ~ 9801571 (+) True LOC122363015
XM_043264789.1 mRNA downstream 83011 10297497 ~ 10320648 (+) True tmod2
XM_043216704.1 mRNA downstream 114456 10328942 ~ 10335753 (+) True lysmd2
XM_043264811.1 mRNA downstream 138089 10352575 ~ 10361312 (+) True acadl
XM_043263966.1 mRNA downstream 201527 10416013 ~ 10422839 (+) True gldn
XM_043264742.1 mRNA downstream 418201 10632687 ~ 10718085 (+) True sema6dl
TU184804 other upstream 843865 9359436 ~ 9365488 (+) True G125192
TU184604 other upstream 1672405 8176353 ~ 8536948 (+) True G125041
TU184436 other upstream 3031077 7177839 ~ 7178276 (+) True G124920
TU184430 other upstream 3036333 7172626 ~ 7173020 (+) True G124914
TU184395 other upstream 3182218 7026318 ~ 7027135 (+) True G124881
TU185257 other downstream 610488 10824974 ~ 10837276 (+) False G125461
TU185261 other downstream 610488 10824974 ~ 10837276 (+) True G125461
TU185314 other downstream 753599 10968085 ~ 10969767 (+) True G125496
XR_006253172.1 other downstream 1011629 11226115 ~ 11231714 (+) False ccnl1a
XR_006246968.1 other downstream 1019845 11234331 ~ 11237147 (+) False selenot1b

Expression Profile