RNA id: TU210175



Basic Information


Item Value
RNA id TU210175
length 528
RNA type TUCP
GC content 0.63
exon number 2
gene id G142281
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 26185660 ~ 26187919 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGCTCTCAGGTGCTCTGCTTCTGTCCAGGTGTCGGTGCTGTCCAGGAGCCTGGAGCTGAAGCTGGGTCCGGATCCAGAGAGCGAGTCTGGCAGGAGTCTCCGGTCCTCCTCAGAAGAGTTGATCTGCGGGCTCTTCTCCGGATCTCCGGCAGGAGGCGCCGTCACCGAGCCTTTATGTTCTCCAGGATCCGGGTCCTCCGAGGGTCCCTGCAGGGGCCCGGCCCGGCTGAAGAGGCACAGCGCCGCCAGCAGCAGACTCTGGAGAGACGCTCCGCTCAACATCGTGCTTCCGGCGCATCCAGTCCAGACCAATCAGAACGAACGGATCCCAAACACACTACAAGACAACATAGaaacTGCCGCGGTCAGTCTCTGTCCGGTGTCCGGTCCGCTCTGTTTACAGTCATCCTACGCGCTCGTGCTGGTCGTGTCTGCGTCAGGTCGCGCCGCGCTCGAGTCCTGCAGACGCGCGAGGATCTGCGCAGACGACCGGAAACACTCCCCGATCAGCAGCGACTGCCCCGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210125 lncRNA downstream 10781 26168534 ~ 26174879 (-) True G142273
TU210146 lncRNA downstream 26078 26149891 ~ 26159582 (-) False G142273
TU210159 lncRNA downstream 95207 26088456 ~ 26090453 (-) False pgfa
TU210160 lncRNA downstream 95207 26088456 ~ 26090453 (-) False pgfa
TU210161 lncRNA downstream 95207 26088456 ~ 26090453 (-) False pgfa
TU210177 lncRNA upstream 2144 26190063 ~ 26191918 (-) True G142282
TU210174 lncRNA upstream 42387 26230306 ~ 26231483 (-) True G142280
TU210170 lncRNA upstream 44105 26232024 ~ 26232545 (-) False G142278
TU210171 lncRNA upstream 44105 26232024 ~ 26234245 (-) False G142278
TU210165 lncRNA upstream 45320 26233239 ~ 26234245 (-) False G142278
XM_043220325.1 mRNA downstream 1570 26176901 ~ 26184090 (-) True actr10
XM_043220561.1 mRNA downstream 9590 26168534 ~ 26176070 (-) True LOC122325525
XM_043220560.1 mRNA downstream 22609 26159166 ~ 26163051 (-) True LOC122325524
XM_043220559.1 mRNA downstream 33137 26149891 ~ 26152523 (-) True LOC122325523
XM_043220558.1 mRNA downstream 41241 26140448 ~ 26144419 (-) True LOC122325522
XM_043219656.1 mRNA upstream 9660 26197579 ~ 26211185 (-) True LOC122324910
XM_043220188.1 mRNA upstream 26744 26214663 ~ 26216463 (-) True arf6a
XM_043219090.1 mRNA upstream 47500 26235419 ~ 26242824 (-) True fkbp3
XM_043219620.1 mRNA upstream 97894 26285813 ~ 26287605 (-) True LOC122324887
XM_043219621.1 mRNA upstream 99918 26287837 ~ 26288247 (-) True LOC122324888
XR_006247174.1 other downstream 88689 26088415 ~ 26096971 (-) False pgfa
XR_006247173.1 other downstream 88689 26088415 ~ 26096971 (-) True pgfa
TU210061 other downstream 131191 26050829 ~ 26054469 (-) True LOC122324466
XR_006247179.1 other downstream 131291 26052206 ~ 26054369 (-) False LOC122324466
XR_006247180.1 other downstream 131291 26052206 ~ 26054369 (-) False LOC122324466
TU210168 other upstream 44105 26232024 ~ 26234245 (-) True G142278
unassigned_transcript_2516 other upstream 426724 26614643 ~ 26614730 (-) True trnas-gcu_32
TU210476 other upstream 734896 26922815 ~ 26924987 (-) True G142444
TU210568 other upstream 1041884 27229803 ~ 27256258 (-) False LOC122325335

Expression Profile