Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043225517.1 |
| length | 1289 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 9 |
| gene id | LOC122329289 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 5779005 ~ 5793166 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0044206 | UMP salvage | biological_process |
| GO:0044211 | CTP salvage | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | molecular_function |
| GO:0004849 | uridine kinase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU229847 | lncRNA | upstream | 510 | 5748369 ~ 5778495 (+) | True | G155204 |
| TU229635 | lncRNA | upstream | 381082 | 5396558 ~ 5397923 (+) | True | G155078 |
| TU229605 | lncRNA | upstream | 543054 | 5216936 ~ 5235951 (+) | True | G155063 |
| TU229552 | lncRNA | upstream | 681861 | 5096528 ~ 5097144 (+) | True | G155032 |
| TU229538 | lncRNA | upstream | 801695 | 4976669 ~ 4977310 (+) | True | G155024 |
| XR_006247894.1 | lncRNA | downstream | 1434 | 5793282 ~ 5796312 (+) | True | LOC122329298 |
| TU229931 | lncRNA | downstream | 127918 | 5919766 ~ 5920057 (+) | True | G155262 |
| TU229932 | lncRNA | downstream | 132554 | 5924402 ~ 5924611 (+) | True | G155263 |
| TU229985 | lncRNA | downstream | 343132 | 6134980 ~ 6137638 (+) | True | G155295 |
| TU230030 | lncRNA | downstream | 584222 | 6376070 ~ 6380365 (+) | True | G155330 |
| XM_043225510.1 | mRNA | upstream | 126145 | 5648485 ~ 5652860 (+) | True | LOC122329285 |
| XM_043225390.1 | mRNA | upstream | 274666 | 5492958 ~ 5504339 (+) | True | LOC122329193 |
| XM_043224035.1 | mRNA | upstream | 685835 | 5083544 ~ 5093170 (+) | True | exosc10 |
| XM_043224036.1 | mRNA | upstream | 685835 | 5083548 ~ 5093170 (+) | False | exosc10 |
| XM_043224038.1 | mRNA | upstream | 703433 | 5029758 ~ 5075572 (+) | False | slc2a4rg |
| XM_043225531.1 | mRNA | downstream | 5215 | 5797063 ~ 5817031 (+) | True | LOC122329297 |
| XM_043225201.1 | mRNA | downstream | 85151 | 5876999 ~ 5880243 (+) | True | snx21 |
| XM_043225164.1 | mRNA | downstream | 91234 | 5883082 ~ 5885477 (+) | True | wfdc2 |
| XM_043225161.1 | mRNA | downstream | 102130 | 5893978 ~ 5919163 (+) | True | phactr3a |
| XM_043225162.1 | mRNA | downstream | 102130 | 5893978 ~ 5919163 (+) | False | phactr3a |
| TU229052 | other | upstream | 2082367 | 3694652 ~ 3696638 (+) | False | ube2t |
| TU229053 | other | upstream | 2082367 | 3694652 ~ 3696638 (+) | False | ube2t |
| XR_006247841.1 | other | upstream | 2769395 | 2995169 ~ 3009610 (+) | False | rbm10 |
| XR_006247840.1 | other | upstream | 2769527 | 2995169 ~ 3009478 (+) | False | rbm10 |
| TU228663 | other | upstream | 2822280 | 2955085 ~ 2956725 (+) | False | G154424 |
| TU230095 | other | downstream | 800758 | 6592606 ~ 6594735 (+) | False | si:ch211-220i18.4 |
| TU230359 | other | downstream | 1434146 | 7225994 ~ 7238919 (+) | True | G155561 |
| TU230347 | other | downstream | 1507431 | 7299279 ~ 7304358 (+) | False | tcea2 |
| TU230667 | other | downstream | 2539893 | 8331741 ~ 8333376 (+) | False | LOC122328506 |
| TU230751 | other | downstream | 2696238 | 8488086 ~ 8488641 (+) | True | G155799 |
