RNA id: XM_043233744.1


Basic Information

Item Value
RNA id XM_043233744.1
length 2882
RNA type mRNA
GC content 0.44
exon number 8
gene id bcl2l12
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 12120674 ~ 12127106 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCAGGACAGGTCAGAGGGTAGGCAGGAAGAAGAGAGTGCACAGCTAAATAAAGACAGACAAGATGAAGAGACCAAGTGAAGGAGGGTGCAGACGCGAGAGCATATCAACTCTGCTAAAGAGGAAATAACTCTGAGGTAAGACATCAGAGAGCAGATGAAGcttcagaaaagaaagagatagCTGCACGGACAAATATGAATTTACCAGTATTAAGAAAAACCTTGAGGGTTTGTCAACTTCTGCTGAGAGGCTTTTGTGGTAACTACTGATTTCAATTTCTGATATTTTCTGTAcctgcaatttttttaatgatgaacaACATTGTGACCTTTTAAAATTGTGTAGACTTTCAACTGCAATTTTACTTTGAATACTTTCAATTTGAATTCTTCTcagaatcctttttttttttttttttttttttttttgctaatgaCTAACCTTTTCTATCAATGCTCTAAACTTTCCCAGCAATTGATTTCATAACAGGATACCATGTCTCCGTTTCTCTGTGTGACCGTCCATCTCTGCCTCTCCCAATCCTTGTACCAGTGTCTGATTTACAGATGACGCTGGACGGGGTTTGGGGGGGGCCGAGGGAGGACAAATGCTCCACATCTTTCCTGTCATCAAAGTCGACAGTAAAGTAAAGTACCGGTCtccaaataactcttttctCAGTGGCTGtaaaatatgttgtgttttgtctgaaaataaacactatTTGGTGAAACACATACccaagtgcttttgtttttcagttgtttcattttgttttatttctcactGCCATTGGTTTGttcttttgctttcattttactTTAGAGTGCATTCAATTCGTCAAAACAGAGAAATTTGTCTTTAACACTAGTTGCTGAACTGTAAATAAACATGGGCTCCCCTAACAGAAGTAAACATTATAAATTCGCATATAGGttattcttacaaaaaaaaagtgtcaaaatcGTCAAAATGAGTTCTACCTAAAACTGTCGCGCTGAGAACACATATGATTAATTTCTATAAAAGTTTGTTGCTGTATCATTTGAATCTACTGCTAGATTGGACCCTGTCCATTGGGAAAATGGCTTCGTCCTACGCCAATCCTCAGTGACATGCGCAGTGCGCACCGCTGAACTCGGTCATTCCGTAGGACGGACTAATTGACGCGGTGGTGGAACCGGTAGGGAAGGTAAAGCTCTGTCGGTATCGACAGGCGAGTATCTATAACATCGATATGAATCACCGCTTTAGATCTGATTTGATTCTCCGTGAGAACTGACCTACATATGAACTCTCCAGTACCATCAGAAACAAGTGACTCCCAACTCGTCTGAAGTTGACACAGCTCGCTCGGCTGAGTCGCTCGCACTGCGGGCTATCTGTTTTTGATTTTAGTAACCGTGTTTTAATAATATCGACTTTGTCGATAAGTCTGGCTTTGTTCGATTTTAACACGTCGCGACTCAGCTGATTCCTTCGGACGTCGAGGTGACTTTACTTACCAGttctctctctgtctcagcgATGGCAGACGTGGCGGTCAGGCCTGCTTCCCCCTCACCCTCCATCTCTCTCCTGGAGATCAAAGCGGAGACAAGGTTTGTTCTGAAGTCTTTCCTGCGTCACTCTCTCGCGATTCCTCCTGGGGAGCGCCCTGGAAGGATAGGAGGAGAATACAACGACCCAAACAAATACAGTGCCTcgacaaataataaaatgaagaaagatGCAAATGGTTGGGACTCCTTGGACGAGGAGATCAGTGCCGCAGAGGAGAAGAAACATggaattaaaaatttaataaaaagacgACTGAGAGCCCGTTCCTCTACAGTCGGTCGTGCTAAGAAAGAAGGAGGTTCCGACCTGACTCCATACAACACCCTTGTGAAGCAGAGTCACCCGGGCCAACCTGACAAGCCATCACCAAATGGGACACACAGTTTACCCAGAAAAACAGAGgaagaGTTATTCGTACCATCCTCTGCATCTGAAGAGGAAGGTGACAGAAAATCAGGGGATAAAactaagaaaaagaagaaaaaactaaaaatatctgaTATACTGAAAAAGGTGTCATTCAAAAAAGAAGAGCCTCGTCCTCAGCGCCCAACCACTCTACCTCTTAAAGGAGCTACAGGTGTTTCTCAACCAGATGATCACCCTCTTTCACCATCTCATCCACCTGAGTTTTATGATGGTGTGGCAGATTCTCTGGACAGAATCGCACAGAAACACACTCTGAAAAAGAAATCCCCTGTTAAACCAAAGCCTGTGCCAAGTACACACAAAGACGACAAAAACAAAGAGGCTGTGGTTCAACAACTAGTGCAGATACTGGCTTCAGAGGGGGATGCCATAAACGAGAAGATAAATACCAACCCCTTCCTGCGGTCCACCCTCACACGCCTGTCCTACTCATCCTTTGCTAAACTCCTTGACACGTATGCCAGTCAGAGCGAAGAGCCCCCCGCTCCGGCTCCAGTCAGCCCTACGCTGAGGCGTCTGGCCGTCACCATGGATGTGTCTCGACGGGTGGTCACGGCCACTGGAGTTCAGCGTCTGACGGGGTATGCCGAACGCTACATGGAGAGCTTTGCACCGTGGGTGAGGAATCACGGAGGATGGGGGAGCATTGCACAATTGGATGAGGGTCTGGAGTGTGATTGACCTCAGTCGTTGATCTCTGTTCATTATGAACTCTGGATCATGTAGCATGACCTCTGTGAGGAATGGTAGAACAAACAGCAGCCTGGGCCAACTGACACTACTTGATTATATGGTCTTTATGctgatgtatttattatttttttatcatttggatgttttgaatttttatgtgACTTTTATaccaaaatacacaatttcaaTCATCTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU28698 lncRNA upstream 1899 12118538 ~ 12118775 (+) True G19263
TU28697 lncRNA upstream 2765 12117343 ~ 12117909 (+) False pax10
TU28687 lncRNA upstream 46171 12074231 ~ 12074503 (+) True G19257
TU28685 lncRNA upstream 47601 12072719 ~ 12073073 (+) True G19255
TU28679 lncRNA upstream 71252 12042884 ~ 12049422 (+) False prr12b
TU28710 lncRNA downstream 5523 12132629 ~ 12134957 (+) True G19274
TU28736 lncRNA downstream 100829 12227935 ~ 12228520 (+) True G19287
TU28700 lncRNA downstream 119102 12246208 ~ 12249997 (+) False LOC122341822
TU28784 lncRNA downstream 384820 12511926 ~ 12513721 (+) True G19326
TU28785 lncRNA downstream 384820 12511926 ~ 12513721 (+) False G19326
XM_043235680.1 mRNA upstream 2735 12114048 ~ 12117939 (+) True pax10
XM_043235899.1 mRNA upstream 17742 12098906 ~ 12102932 (+) True LOC122342107
XM_043235932.1 mRNA upstream 22469 12092898 ~ 12098205 (+) False LOC122342134
XM_043230519.1 mRNA upstream 30469 12075141 ~ 12090205 (+) True trpm4a
XM_043230529.1 mRNA upstream 30469 12075194 ~ 12090205 (+) False trpm4a
XM_043235777.1 mRNA downstream 14195 12141301 ~ 12143887 (+) True unc119.2
XM_043235657.1 mRNA downstream 18005 12145111 ~ 12149131 (+) True mmp25a
XM_043234868.1 mRNA downstream 22691 12149797 ~ 12158601 (+) True srrm2
XM_043235314.1 mRNA downstream 32076 12159182 ~ 12162641 (+) True thoc6
XM_043234070.1 mRNA downstream 36504 12163610 ~ 12168731 (+) False si:dkey-16l2.16
TU28690 other upstream 19822 12092603 ~ 12100852 (+) True LOC122342134
XR_006249731.1 other upstream 286750 11773201 ~ 11833924 (+) True kcnc3a
XR_006249728.1 other upstream 286750 11773201 ~ 11833924 (+) False kcnc3a
XR_006249729.1 other upstream 286750 11773201 ~ 11833924 (+) False kcnc3a
TU28236 other upstream 750922 11368893 ~ 11369752 (+) True G18949
XR_006249244.1 other downstream 176258 12303364 ~ 12312990 (+) False nbr1b
TU28786 other downstream 384820 12511926 ~ 12513721 (+) False G19326
TU28787 other downstream 384820 12511926 ~ 12513721 (+) False G19326
XR_006250478.1 other downstream 392731 12519837 ~ 12528803 (+) False gtpbp1
TU29192 other downstream 708275 12835381 ~ 12987913 (+) True LOC122332158

Expression Profile