RNA id: XM_043234770.1


Basic Information

Item Value
RNA id XM_043234770.1
length 7683
RNA type mRNA
GC content 0.48
exon number 6
gene id wu:fb95e10
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2212166 ~ 2238246 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCCGAGGCGACAGAAAAGAAGAGGGACGGCGCGCGAAGAAAGGACGCGGGGTGGCCTGTGCGATGACATCATCCCTCATTTGCATAAATCTCAGCCTGAGCGCTGATTGGTCGCGGGCCGGAGAGACCGAAGCCGCTCGCGCTTTTCATCCTTTTCAACGCTCCCTCTCGCGACCGCatagtgtgtgcgcgtgcgtgcgtgcgcggaTCGCCGAGCGCCGTTTCATTCTCTGCTGCCAGGAGACGCACATCTCTTTTATCGCCGGTAGACAGTCAGTCAGCCCCGAACCGCCTCCGCTGCTGGTTTTTCCCTCAACGTTTTAGCTGCCGGTTTTTTCCTCGACTCGCAGAGCTTCTCGCCGGGTTCCGCTTggaagcaacaacaacaacaaaaaaaaaaacgggagGAGACGCGAGTACCGACTGGGCGTTGCTGGAGGAAAAGCGCTATAGACTCGGTCTGCCATAACCGTCTGATAGCAGTAGACTCCAACTAGTAGACTGAGTCCTGGGTTCCCGATTCCTCTTCTGTTGAGACGGACCTCCAGGACTAGGACAAGATGAAACCGGATGGTGTTGACACGGCAGCAGTGGAGCCAATGGAAGCATTAAACGCAGGTCCTGCGGTCGAGGTGGCACCAGTGGGTGAAGCTCAGGACCAGGCTTTGCCTGCAACGCAAACAGAGGCAACCAACAAGACCGGAAAAGACAAGCCTGTGGATCCCAAAGCTAAGACGAAGGCTCCCGCCAAAACAAAGACAACCACCACTGGAACCAAGGCATCTACGACCAGCTCCCGTCCAACCACTGGCCAAAGCCGCCTGACAAACGGGGCACAGAAGTCGCAAGCTAATGGCGTCACCAAAAAGACCACCACAGCTGGCCTGGAGAAGAAAACCTTGACCACTGCTGCccctaaaaaaacaacagcttctGCACCCACAACCAAGACCCCAACCAAGGTGGCTGAGAAAAAGCCGGTGGGGACGACAAGACCTACCAGTGCTCCAGCCAATGGTGTGAAAACAACAGGGGCAGCACAGGCCATCAAGAAAGCCCCAGCTGCACCAGCCAATGGTCTGAAGTCTAAACCAAAAACTACAGCTCCAGCTACAAGACCCGCTACGGCACCCACCACCAAGACCAGCACCACTGGCTCTCCCAAACCTGATAAGACACCTGTCGCCAAGACAACCAGGTCTGCTGGCCCTGCTCCTGCTGCTCGTTCTTCTCCTGCTGCCCACAAACCTGGGACACCAGTATCTGCCAGCAAGACATCTACAGCTGCATCCAGGCCAACTACTGCTACACCCAAGACACCATCTACTACTGCTAAACCTTCTCCTGCTAAAACCACAGCGCCCTCTGCTGCCCGCACTCCCACTCCTAAAACCACAACACCTGTCAAGAAAGATGTCAGTAAGCAGTCATCTACTCCAGCGGCTAAGAAGCCCACTTCTTCTCCGCTTACCCGGCCAGCACCAACAAAGACCACAAAGTCTGACACCCCTAAGCCAGCCTCCACTGTCAAGGCAGAATCAGCCTCAAAAAAATCCACTACCCCCAGCAAGGTGGCAGATGTTAAGACTGGTAAACCCAAGGAGAGCAAAGCAGCATCTTCCAAGGAGGTTAGCGCAAGCCCCAAGACCACAGGCAACAAGTCCACCACTAAGACAAGCAGCCCAAAGAAGGCAGTTGGCAGTAGCACTCCAATGCCACTGAAGGGTGGCCCAAAAGCCTCCCGGCCTGCAGATGCAGCAGCCAAGGAGGCTGAGAAAAAGGATGTGGTACCTGCTGTGGTTGCAGCCACTACTGCAGCCGTTgctgttgtttctgttttgacCTCTGAGGCAACACCTGAAGACTCAGCTATAGCTTGTGTTTCTGCAGCCACCGAAGATGCATCTGAGGACCAGTTCATCCAGGCCAATCCCGCTGCCTCTGAGGTGAAATTAGAAGACTCATTTACAACTCTAATTCCTGCTTCCTCTGAGGACTTTAAAGAGAATTCTAAAGAAATGGACACAAATGTCGCCACCACTATTGAAGCACCTGAATACACAGTTACACCTGTAATTCCTCATGAGGAAACCCCTGAAGACTCTGTTACACCTTTCAGTCCTGAAGAAACACCTGAGGACCCAATTATGTCTGTCATTCCCCCAACCTCTGATGAGGTACAAGAGGTACAAACTCTGTCACCTGTAATTTCTTCTGAAGAAACACCTGAAGAAGTAACTACACCCGTCATTCTTCCTACCTCTTATGAGGCACGAGAGGAAACTGTTTCACCTGTCATTCCTTATGAAGAAATACCCGAAGACGTAACTACATCTGCCATTCGTCCTACCTTTTATGAGGCACGAGAAGAAACAGTTTCACCTGTcatttctgctgcttttgaAGAAACACATGAAGACTTAACTACGTCTTTCAATGTTCCTACCACGTATGAGGCACGAGAAGAAACTATTTCACCTGTAATTTCTGCTGCTTCTGAAGAAACACCAGAAGATGTAACTACAGCTGTCATCCCCCCTACCTCTTACGAGGCACCTGAAGAGTCCTTTTCACCTGTCATTCCTCCTGCCTTTGCTGAAGCACctgaagaaacaactgcacctttCATCCCCCCTACCTCTTATAGGGCACCTGAAGAAAAAGCTTCCCCAGTCACTTCTCAAGCCTTTGAAGAGGAACCTGAAGATACCATTACACCTGTTATTTCTCCTACTACTGATGAGGTGGAACCTATATATGCCCAGGACACCCCCCAAATCATGGACACTTATAAAGATGACAATGCCATGTCTCAGCTGGTTGCTGAAATAGAATCAGTCAGTTTAGAGGATCCAGTGCCTGTTGTGTCTCCTCTGGGAACCACAGTACTGTCCCCACCATCCTCTCCCACCGGTCCACCATCCATGCCAGTTGAGCTCCCAAGCTCAGCTCCCTTCCTGGGCTTGCAGGGTCCAGCTGAATCATGGGTACAGAGCTCTTCACAGTACCCCAGTTCTGCGACCATAGAGAATGAGGAGCAGTATGAGGAAAGACAGTGTGATGAAGAAAGcgaggaggaggatgaaaaAGATCAGGATGACACACAGATGCCCTCTGCAGCTGAGAATGTAATTGAAGACTTTGATCTGATGAGCTCCAGTGGTGGGGATCACATCAAAAATGCAATTCCTGTCTCCCCCTTGCAAGATCGAGAAGAGGCGGTAGAGAAAGCTGAAGAAGAGATTAATGAAGACAATgatgatgaggaagaggaggaggaagagaaagaggaggaggaggaagaggaggaggaggaacagGTAAAAGAGTTTGGCATAAAGGAATCAGAGCCCCAGACAGAGAAAGAAGTTGACCTTAAAAAGGGGGTGCTGGATTTCGCTAGCTCTGATTGGGGTATGATGCAATCAGATGACATGTACAGCAGTGACAAACATGACTCAGAAGTAACATCTCCCTTTAATGCTGAAGACAGCTGCAGTGCTAATGAGACAGGTGATTTCATCATGACCGAGGCAGACAGGGAACAGCCATTCACAGGGCCTCCTGGAATCCAGTCATTTGGTAgtgaagatgaagaagaggatgaagaggaagaacaactgaagaaagaaatggATCTAGCATTAGAGCATGATGATGAACACcacaaacaacagaaagaattggaggaggaagatgaagatATAGAGATGGTCCACAGGGGCATGGATGATAGTGCACTTGGGGTTAGTAAAAATGATGGtaatgaagatgaagatgatgaggaTTACAGAGAGGAGAGTCATCTAGACCTCAACAGCATTGGTCACACTGTTTCAGCAACATCTATGCCTCTGACAGCAGCATGGAGTAATTCCAATCCATTTTCTGATCCCTGGGCCCAGCCTCCTTCCGTCCTGTCTGAATCGAACCTGTCAGCTTCAAGACTTCAAGATCCAGACACACTCACCAAATTCCCAGCCGATCCAGACACAACCACCGCATTCTCAGCTGAACCAGAGACACCCCCTAGATCCCCGGCTGAGGCTTTTCTGGACATGAGTCCACCCCTGATTCAGGCCTCAAAACCCCAGCCTGACCTCCAAGAAGAGACCGGGAGCTCAGTCCAAGTAGAGTCGGGTATCTTGGCTCCTCCTGCCATTGGAATGTCCCAGTCCAGCACCCTCAGTGGAACAGCCCTGGCTGCCCACAGCAGCAGTGAGACCAGCACACCTGAAGAACTTCGAGATTATGACAGCAGCTCAGGTGTAGAATCCCGATCAGACAAGCAGCAGACGCCAGTCCCTGCCATGCAAGCAGACATAGAGCAGGACTTAGGTATTCATCTTGAGCGAGGTGATGGGGAGGAGGAAGAGGCCGAAACGTTGCCGGCGGATGAAGTACTGGGTGAGGCCGCAACAGCACCAGCCTCCGTACCATCATCACCATCAACCTCTGGTGATGAGGCCAGTGATACAGAGGGTGAGATGCAAATCAATGATCCTGATGTTGCGGTTGATGACAACGCCACAGATCCTCACAACCTTGCTGCCCTGGAGGAAGATGAGGAGGCTCCTGAACACATTGGAGAAGAAGACGGTGACACGCCTCAGTCAGCCAACTCTGTGGCTTCCTACGGTTTTGACTGTTCCGCATCCATCTCCAATGCCCACTCTATGGCTGAGAGCTGTGGAAAGAGTCCAGGCATCTTTAGCCTGGAGAATGAAGAGCAGCTTCCGGAAGAGGCTAAGGATCCCTCTTTCATCAAGGAGCTCACCCTGCCAGCAGCCACCGCCTACAGTGATGACTTGTTGGGCTGCCCAGTGGATTTGCTGCCTATCAGCGAGCCCACAGAGAGAGATGCTGGGTTTGACGAGCACTACATGCTGTGCAGTAAGACAGACCCAGGCGCCATGGAGGAAATGGATCCTGAGTCCCCCATGCACCTCTCACCCCAACACGGGGACGATTCTGATGGCCAGCCACCATACTACTCTGCTATATGTGATAAGACTGATAACTTTCTGGCAGGGAAATCCGGGAACACTATACAGACTGGTGAGCACCAGCTTTCACTGGAGAATGGTAACTATCCGAGGCTAACCCAAGAGCTGAATGACAATAACTACCTTGCTCCCCTGCCGAACACCCACAGGCAGCTACAGCAGCCACTTCCTCGCATCAGCGTTCAACACGTGGATGTTCCTCCGAGGGTCCCCCCGACTTCACTGATGCCCAATGTGCAGCTGCGACGGCTAGAGCATCACCAGTTGCAGCTGCGGCACATCCGGCAACGGCAGGAGCAGGAGCGGCTGCAACGACTCTGTCTGGAGGAAGAAAGGCAGCGGCAGGAGCAGCAGAGGGCACTGGAGAGGCAACGCCGAGAGCTGCTTCAGTTGCagcttcagcagcagcagcaggaacACCGCCTCCGCCGACAGCTCCTGCAGCGGCAGCTTGAGATGGAGCAGCAACAGAGGCTCAGACAGCAGGTGAAAGGGCCCTCATCCGGGCTCTGCACCATCTATGAGGCCATGGAGACAagtgaggaggaagaggaggatgcaGAGAACCAATCCACCGGCCACCGAGGTTCCCCAAAGCAAATGGGCCATTCCATCCCGACCAACGGAAACCTTCGGCGACCGCCTCCGCAGGAGCTGGACTGGAACACAAAACTGGACATGGTCCAGCAGCTGATTAACCAGGCTCTGCTTCTGACCGGGGAGGATGGCTGTCAACCGCTCCTGTACCTACCTGGGCAAGGAGGGGGCATCCTCAGCCCTCTGGAGAGCAGCCTGTGGCCGCACATCATGTCCCACTTCGACTGCACCGCCGCAAACGTGGCCTCGGTCAGCAGTTACTCCCCGAACAGCCAGGACAGTTCTCCACAGGGCGACTGGACTGTGGTGGAGCTGGAGACCCATCACTGAGTCTCAGAGCACCATTAAACCCAGCATGTGCACTAATAATACAATATCAATCCCAAACCATCCCAAACTATTCTTGAAACACTGAAGTGCGTCCCATAAGTCTTCTAATCGAGCTTCATGTGTACTCATCCACTCAGAATGCAGTCATTCATTATGCAAACACCTTCCTGAAGATGTTCGGGTTTCTTTGTAGTGTAAACTCTCCctcaaacatatttaaacatttaaatctacAAATATTTATGgattaatagtattttattatttctgacaACTCAAGTCAACAAGAAAACTATATGTACTTGTTTTTGGTCATACTGTAAAAGATTTGTGAGAGAAAATCTTCCATCAAAATTCAAGAAtctgctttacatttaaagcaaattTTTAAGGTAATTAGTTTACAAACAGCCGACCAGCTAATTTTAGGTCAGTGTTCTTCCTAATCGTATCTAAGCCATCCATTATAAGTCTTGCAGTTTTTTATAAGGTTCTGATAAGTTGATCCAAGTGTGCTTCATTAGTTTTCGAAATGTTTAGTATTGGAGAACCTTAGAGGACaggtttgaaaatgatttcGAGCAACTATTGTAAGTAATATTGCCTTTCATAACggtcatttattttgaatctgTATATGGACACTTCTCACTTCTTAATCTTATCTATTATGTTGATTTTAGCTATTGATGGAAGGCCGAACAGGTTCACCTCAAAGTTCTTATTGCCAAGCAGCTATCTTTGGTTCTCGATAAACTATATATAAGTACAGATGCCAAATGGTCATATTTAGACTTATTTTATCAGGTTAATTGAGACATTTACATAGATATATATCATCTTTTCTGTTGGGTTAAGgctaatgttttgttgttgtctaAGGACTGTTGACCTCATGCATGGCTTCAGACAGAGCTGCTCTGTTTGCCATTCTCTTTCAGCTGTGGGGGAAACTCTTCTCTCCCGACATTCCTGAACCATTACCTCATTTCCTGGGTCCTTCTTGTTTCAATGGGTTTCCTGGGTTACTGATGATGTCATGGCAACTAGAAAAAAGGAGGTGTCTAAAAGACACATGAGGGGGAAAAGGATGGAGAGAGAAAACGTTCTAAAGACTGAAAGCTTTAGTAAATGAGCCGTTTGTCAATGCCATCAATCTGATTTTCCTGAAATGCTGTGGAGGGTGTATTTTTATACAGAGTTAGATATATAGCGTCTGATGGAGTGTGTGTCTGCTGACAAGAATTACtataagtattaaaataattaatatctgTGTTATATTTTCTAcagcattttctgtttttccatctttttattatttttggttaatGTGTACTGTATtcgctttaaaaaacaaaacaaaatattttgcttATTGACTAGACTGTTGCAGTAGCGCCATCTACAGATGATgtgtcatgaaaaaaataatgaaatgctttcTAAAGGCAAACCAATGTGTTCAAcctttatactatatattttacatgatgTTATATTAAGGAATATATTATTCAGCCACCAGTTATAAATGTCCTTTCTGGggtaaactatttatttttcctttccttAATACTCATTTCCTTacttattatgattttattaatttgtattgatttattggAAGATGCACACAATTACCGGGGACAGCTGTGCCATGTTGTATTGGTGTGGTAAACAGTGATTATAGGAAATGGTTGTAGTTTCCTTTTTTCTCTATTAAAATCATAAGTGCAGCGATGATAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250527.1 lncRNA downstream 71807 2136069 ~ 2140359 (-) True LOC122342126
TU24376 lncRNA downstream 86448 2125316 ~ 2125718 (-) True G16385
TU24108 lncRNA downstream 210595 2001274 ~ 2001571 (-) True G16217
TU24102 lncRNA downstream 274408 1930044 ~ 1937758 (-) True G16212
TU24051 lncRNA downstream 338640 1870761 ~ 1873526 (-) True G16179
TU24391 lncRNA upstream 1052 2239298 ~ 2240445 (-) True G16393
XR_006250484.1 lncRNA upstream 24425 2262671 ~ 2265631 (-) True LOC122341671
TU24405 lncRNA upstream 57861 2296107 ~ 2354938 (-) False G16400
TU24406 lncRNA upstream 57861 2296107 ~ 2355467 (-) True G16400
TU24407 lncRNA upstream 60791 2299037 ~ 2358165 (-) True G16401
XM_043234984.1 mRNA downstream 1933 2182526 ~ 2210233 (-) True pkn1b
XM_043234985.1 mRNA downstream 2510 2182526 ~ 2209656 (-) False pkn1b
XM_043234983.1 mRNA downstream 9597 2182526 ~ 2202569 (-) False pkn1b
XM_043234982.1 mRNA downstream 9601 2182526 ~ 2202565 (-) False pkn1b
XM_043230546.1 mRNA downstream 35213 2165727 ~ 2176953 (-) True engl
XM_043235182.1 mRNA upstream 5645 2243891 ~ 2253235 (-) False mcoln1b
XM_043235183.1 mRNA upstream 5646 2243892 ~ 2253448 (-) False mcoln1b
XM_043235184.1 mRNA upstream 5646 2243892 ~ 2253234 (-) True mcoln1b
XM_043235180.1 mRNA upstream 32352 2270598 ~ 2290362 (-) False LOC122341666
XM_043235179.1 mRNA upstream 32352 2270598 ~ 2290362 (-) True LOC122341666
XR_006250468.1 other downstream 9597 2184445 ~ 2202569 (-) False pkn1b
TU24084 other downstream 211837 1788245 ~ 2000329 (-) False zc3h7ba
TU24079 other downstream 212026 1788245 ~ 2000140 (-) False zc3h7ba
TU24082 other downstream 212026 1788245 ~ 2000140 (-) False zc3h7ba
TU24085 other downstream 212026 1984597 ~ 2000140 (-) False zc3h7ba
TU24410 other upstream 65081 2303327 ~ 2362399 (-) True G16402
TU24428 other upstream 95310 2333556 ~ 2423546 (-) False LOC122341602
TU24448 other upstream 205822 2444068 ~ 2450203 (-) True G16421
XR_006250471.1 other upstream 240882 2479128 ~ 2484224 (-) True LOC122341591
XR_006250470.1 other upstream 393536 2631782 ~ 2640091 (-) False nup85

Expression Profile