RNA id: XM_043240599.1


Basic Information

Item Value
RNA id XM_043240599.1
length 2244
RNA type mRNA
GC content 0.40
exon number 6
gene id mob1ba
representative False

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15878865 ~ 15885104 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGCGAGATTTGTGGCTCTGGAGAGACTTTGGATGGGAAGGAGAACTTTTGCACGGGCAGGATCAGTGTTGTTAGAGCGTTAAGGATATTAAGGCTGAAATACTTTGCTTTTCGACATTTCAACACTCAGGATAACGGACTAGTGTCGATTTCGTATCTACAGCGCATTTTCCTCAAGGAGAGATGAGCTTTTTATTTGGAAGCCGCTCGTCTAAGACGTTCAAGCCGAAGAAGAACATTCCCGAGGGCTCACACCAGTATGAGTTACTGAAGCATGCCGAGGCCACGCTGGGCAGCGGGAACCTGCGCATGGCGGTCATGCTGCCCGATGGAGAGGACCTCAATGAATGGGTGGCAGTCAACACTGTGGACTTCTTTAACCAGATCAACATGCTGTATGGGACCATCACAGACTTCTGCACTGAAGAAAGCTGCCCGCTAATGTCTGCTGGACCCAAgtatGAATATCACTGGGCCGATGGAACCAACATAAAAAAGCCAATTAAATGTTCAGCTCCAAAGTACATTGATTACCTGATGACTTGGGTCCAAGATCAGCTCGACGATGAGACACTTTTCCCTTCCAAAATAGGGGTCCCTTTCCCAAAGAACTTTATGTCGGTGGCCAAGACCATTTTGAAGAGACTCTTCCGTGTTTACGCTCACATCTACCATCAGCACTTTGACTCTGTTATCCAGCTGCAGGAGGAGGCGCACCTCAACACCTCTTTCAAGCACTTTATCTTCTTTGTTCAGgagtTCAATTTGATCGATCGGAAGGAACTCGCACCCCTTCAGGAGCTGATCGAGAAGCTCACATCCAAGGACAGATAAATCTGCTTCTCCTATCAACATCTTCTCCAGTTTCTCTGTACAGGCAGCCTGGCTTTGTTCTCTGTGTTTGACaggtgtgtgtgggagtgtttCCTTCAAGAGTTGGGAAAATAAAActccagaaaaataaaaagcccTTGTTAAGCCACAGCTCAACCATAGGTCAAGGTCATAGCGGAATTTTGCTCCTTTTGACATCGTCTCGAACACAATCTAAGTGCCTGATATGTCCACTTTCAAAATTgctcatttgttaaaaaaaaaaaaaaaaaaagcgctacCACTGCTATAAAACgtctttattgatttatattttgactttttttaggAGTACATTGATGCTAATTAGCGGtatgttagctttttttttttccttgtcatGGATTTATTTAGAAGTGCatagatttaaaaatactgaacaAAGCAttcattgatatatatatttttttctcacagaGATGAAGATGTCTTGGCTTCTCTTAAGTACTCATTTTAACTGCTCCCAGTGTCTCAGGACATGTTTGGGATTTCCGTTATCCATTTCAGTAGTAGAACTGCTTTGTTTACTTCAGATTTTATCTAGCCCTCAATGAATGTCTCCTAATTGTAGCACATCGGTCCCGCAGTTTGCCTGCCGTTGCTTTTAAACCACTACATTACTTTTGAATAAGTACTTATGTTGATGAGCCAGATTCTCTCCCAGACGTCACGGGTTTGTCTGTTAGAAGCTGGGATAAAATGAGCTGACTATGCAAGATCGGTCCTGTTTGATCTCATTTTTTTCATACACTATAAAACATAAGGCTTTTATTCTTCTATTCATGGATGTGGAAACCCTGGACACCTTTTAAGTGTATAACTGCAACACATCTAATGAGAGAGATAGACTTTTCTCTAGATCGTAATTAAGCCGCCCCAAGCTCAAAGGTCTAGAACGTTCACTTGAAACGCAAGCTAAATTATGAGGTTATTGCAAGTtgtataaaatatgttacaGATACGAATCAAACTTGATTCTAGTTTAATATCTTTAATAATAACTGCTTCTTATTGAACACACTTATATATTGCTGTCAAAATAGTTTGTGGTCCTCTGTATAATTTAAGCAGTGCTTATGTTCGGTCTTTATGAAGTTCTGCCccatgaatgtttatttttcagaatgttACAGAAAATGTGTTATTCTGAATAACACGGTTAACAGGTTTTCTCAGATTTTCACACCACTTTATTTCAGAACAGAGTAAGATTGATTATAGACAAATGTACTAAACGTTTTTGATGGCAAgttgtaaatactgtaaacagAAAAGGTATGCAATTGGAATAACACGAGATGTGTAACTTGCTGAACTTTTGTGGTACGATGCTGAATACTGTTTATAGGATAATAAACCTGTTTGAACAAAA

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54628 lncRNA upstream 18764 15859759 ~ 15860103 (+) True G37038
TU54555 lncRNA upstream 55116 15821892 ~ 15823751 (+) True G36993
TU54610 lncRNA upstream 63802 15814853 ~ 15815065 (+) True G37024
TU54606 lncRNA upstream 64619 15813103 ~ 15814248 (+) True G37023
TU54639 lncRNA downstream 33402 15918506 ~ 15919285 (+) True G37047
TU54775 lncRNA downstream 167928 16053032 ~ 16053819 (+) True G37123
TU54772 lncRNA downstream 168142 16053246 ~ 16053897 (+) False G37123
TU54773 lncRNA downstream 168142 16053246 ~ 16053819 (+) False G37123
TU54774 lncRNA downstream 168142 16053246 ~ 16054008 (+) False G37123
XM_043240590.1 mRNA upstream 3551 15861054 ~ 15875316 (+) False rufy3
XM_043240422.1 mRNA downstream 21211 15906315 ~ 15910878 (+) True aqp3a
XM_043240546.1 mRNA downstream 36654 15921758 ~ 15927369 (+) True wdr54
XM_043240545.1 mRNA downstream 36657 15921761 ~ 15927369 (+) False wdr54
XM_043238861.1 mRNA downstream 65958 15951062 ~ 15978748 (+) True rhobtb4
XM_043238845.1 mRNA downstream 100682 15985786 ~ 16014415 (+) False si:dkey-40c11.2
TU54012 other upstream 1158380 14718532 ~ 14720487 (+) True G36640
TU54000 other upstream 1226956 14647489 ~ 14651911 (+) False fgf5
XR_006250972.1 other upstream 1573563 14300043 ~ 14305304 (+) True LOC122345142
XR_006250973.1 other upstream 1573563 14300043 ~ 14305304 (+) False LOC122345142
TU53776 other upstream 1586367 14290420 ~ 14292500 (+) True G36495
TU54916 other downstream 598898 16484002 ~ 16560732 (+) False G37227
TU54918 other downstream 598898 16484002 ~ 16560732 (+) True G37227
TU54920 other downstream 601516 16486620 ~ 16561741 (+) True G37228
TU55097 other downstream 1479765 17364869 ~ 17369768 (+) False LOC122344991
XR_006250965.1 other downstream 2957715 18842819 ~ 18847674 (+) True arsk

Expression Profile