Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU104714 |
| length | 798 |
| lncRNA type | read_through |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G77639 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 2127525 ~ 2164947 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:0009056 | catabolic process | biological_process |
| GO:1901565 | organonitrogen compound catabolic process | biological_process |
| GO:0009057 | macromolecule catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0008865 | fructokinase activity | molecular_function |
| GO:0004396 | hexokinase activity | molecular_function |
| GO:0019200 | carbohydrate kinase activity | molecular_function |
| id | description |
|---|---|
| ko03050 | Proteasome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104705 | lncRNA | downstream | 80284 | 2042998 ~ 2047241 (-) | False | LOC111193168 |
| XR_002650297.1 | lncRNA | downstream | 80482 | 2042959 ~ 2047043 (-) | False | LOC111193168 |
| TU104697 | lncRNA | downstream | 99559 | 2008069 ~ 2027966 (-) | True | G77630 |
| TU104692 | lncRNA | downstream | 185910 | 1938885 ~ 1941615 (-) | True | G77626 |
| TU104685 | lncRNA | downstream | 204997 | 1913560 ~ 1922528 (-) | True | G77619 |
| TU104741 | lncRNA | upstream | 19039 | 2183986 ~ 2185863 (-) | True | G77655 |
| TU104774 | lncRNA | upstream | 194784 | 2359731 ~ 2359936 (-) | True | G77683 |
| TU104775 | lncRNA | upstream | 227929 | 2392876 ~ 2393116 (-) | True | G77684 |
| TU104790 | lncRNA | upstream | 283626 | 2448573 ~ 2469056 (-) | True | G77695 |
| TU104793 | lncRNA | upstream | 286475 | 2451422 ~ 2477759 (-) | True | G77696 |
| XM_022672587.1 | mRNA | downstream | 60500 | 2061458 ~ 2067025 (-) | True | LOC111188180 |
| XM_022672456.1 | mRNA | downstream | 66388 | 2047308 ~ 2061137 (-) | True | LOC103031516 |
| XM_022672586.1 | mRNA | downstream | 86239 | 2030382 ~ 2041286 (-) | True | adssl1 |
| XM_007230350.3 | mRNA | downstream | 101714 | 2022283 ~ 2025811 (-) | True | siva1 |
| XM_022672583.1 | mRNA | downstream | 140672 | 1916032 ~ 1986853 (-) | True | akt1 |
| XM_022672457.1 | mRNA | upstream | 56561 | 2221508 ~ 2232432 (-) | True | LOC103039711 |
| XM_015606920.2 | mRNA | upstream | 151680 | 2316627 ~ 2331376 (-) | True | thbs1 |
| XM_022672593.1 | mRNA | upstream | 267208 | 2432155 ~ 2457592 (-) | True | acp7 |
| XM_007257929.3 | mRNA | upstream | 267208 | 2432155 ~ 2457017 (-) | False | acp7 |
| XM_007257925.2 | mRNA | upstream | 313189 | 2478136 ~ 2505873 (-) | True | LOC103025843 |
| TU104704 | other | downstream | 80284 | 2042998 ~ 2047241 (-) | True | LOC111193168 |
| TU104677 | other | downstream | 267144 | 1853644 ~ 1860381 (-) | False | srp14 |
| TU104678 | other | downstream | 267144 | 1853644 ~ 1860381 (-) | True | srp14 |
| TU104667 | other | downstream | 362994 | 1717508 ~ 1764531 (-) | False | LOC103034803 |
| XR_002650296.1 | other | downstream | 696281 | 1368097 ~ 1431244 (-) | True | LOC103042803 |
| TU104742 | other | upstream | 25366 | 2190313 ~ 2190653 (-) | True | G77656 |
| TU104917 | other | upstream | 1032182 | 3197129 ~ 3206216 (-) | False | bmf |
| TU105040 | other | upstream | 1132635 | 3297582 ~ 3348989 (-) | True | G77892 |
| XR_002650301.1 | other | upstream | 1468147 | 3633094 ~ 3638915 (-) | True | LOC111193170 |
| TU105108 | other | upstream | 1526660 | 3691607 ~ 3714277 (-) | False | prkd1 |
