Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022676587.1 |
| length | 1117 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 7 |
| gene id | LOC103027883 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035898.1 |
| NCBI id | CM008301.1 |
| chromosome length | 34292151 |
| location | 32974397 ~ 32982157 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016881 | acid-amino acid ligase activity | molecular_function |
| id | description |
|---|---|
| K04649 | HIP2, UBC1; ubiquitin-conjugating enzyme (huntingtin interacting protein 2) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU20397 | lncRNA | upstream | 3453 | 32903356 ~ 32970944 (+) | True | G15166 |
| TU20398 | lncRNA | upstream | 60836 | 32912229 ~ 32913561 (+) | True | G15167 |
| TU20393 | lncRNA | upstream | 62256 | 32897426 ~ 32912141 (+) | True | G15162 |
| TU20394 | lncRNA | upstream | 63440 | 32900452 ~ 32910957 (+) | True | G15163 |
| TU20367 | lncRNA | upstream | 132894 | 32822574 ~ 32841503 (+) | True | G15141 |
| TU20402 | lncRNA | downstream | 333 | 32982490 ~ 32983383 (+) | False | G15169 |
| TU20406 | lncRNA | downstream | 51022 | 33033179 ~ 33066558 (+) | True | G15170 |
| TU20445 | lncRNA | downstream | 93284 | 33075441 ~ 33096870 (+) | True | G15194 |
| TU20451 | lncRNA | downstream | 98899 | 33081056 ~ 33084299 (+) | True | G15197 |
| TU20656 | lncRNA | downstream | 234255 | 33216412 ~ 33216648 (+) | True | G15328 |
| XM_022676549.1 | mRNA | upstream | 940 | 32964912 ~ 32973457 (+) | True | LOC103038530 |
| XM_007260315.3 | mRNA | upstream | 19109 | 32944699 ~ 32955288 (+) | True | ints10 |
| XM_007260316.3 | mRNA | upstream | 19109 | 32944700 ~ 32955288 (+) | False | ints10 |
| XM_022676524.1 | mRNA | upstream | 68165 | 32877713 ~ 32906232 (+) | True | slc16a2 |
| XM_022676964.1 | mRNA | upstream | 165063 | 32801334 ~ 32809334 (+) | True | thegl |
| XM_022676579.1 | mRNA | downstream | 6967 | 32989124 ~ 32992710 (+) | True | LOC103034989 |
| XM_022676563.1 | mRNA | downstream | 14405 | 32996562 ~ 33032010 (+) | True | LOC103027667 |
| XM_022676603.1 | mRNA | downstream | 104641 | 33086798 ~ 33092311 (+) | True | fgf2 |
| XM_022676611.1 | mRNA | downstream | 120136 | 33102293 ~ 33167611 (+) | True | spata5 |
| XM_007260310.3 | mRNA | downstream | 187953 | 33170110 ~ 33174821 (+) | True | spry1 |
| TU20389 | other | upstream | 49612 | 32921024 ~ 32924785 (+) | True | G15160 |
| TU20126 | other | upstream | 795799 | 32174401 ~ 32178598 (+) | True | G14985 |
| TU20118 | other | upstream | 929339 | 32041062 ~ 32045058 (+) | False | smim13 |
| TU20119 | other | upstream | 929339 | 32041062 ~ 32045058 (+) | False | smim13 |
| XR_002650771.1 | other | upstream | 2202283 | 30747676 ~ 30772114 (+) | False | LOC103032125 |
| TU20413 | other | downstream | 41079 | 33023236 ~ 33036983 (+) | False | G15170 |
| TU20795 | other | downstream | 1237786 | 34219943 ~ 34221268 (+) | False | G15411 |
