Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU39541 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G29480 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 59442779 ~ 59443002 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU39464 | lncRNA | downstream | 117067 | 59324993 ~ 59325712 (-) | True | G29417 |
| TU39431 | lncRNA | downstream | 198944 | 59236497 ~ 59243835 (-) | True | G29393 |
| TU39394 | lncRNA | downstream | 309107 | 59133411 ~ 59133672 (-) | True | G29370 |
| TU39393 | lncRNA | downstream | 310642 | 59131541 ~ 59132137 (-) | True | G29369 |
| TU39359 | lncRNA | downstream | 406650 | 58998543 ~ 59036129 (-) | False | LOC103023855 |
| TU39558 | lncRNA | upstream | 63924 | 59506926 ~ 59528674 (-) | False | snx17 |
| TU39557 | lncRNA | upstream | 64258 | 59507260 ~ 59528674 (-) | False | snx17 |
| TU39566 | lncRNA | upstream | 111329 | 59554331 ~ 59559664 (-) | False | G29492 |
| TU39564 | lncRNA | upstream | 111502 | 59554504 ~ 59559664 (-) | True | G29492 |
| TU39568 | lncRNA | upstream | 131326 | 59574328 ~ 59574536 (-) | True | G29494 |
| XM_007256640.3 | mRNA | downstream | 8466 | 59358827 ~ 59434313 (-) | False | LOC103026850 |
| XM_007256641.3 | mRNA | downstream | 8467 | 59358827 ~ 59434312 (-) | True | LOC103026850 |
| XM_007256629.3 | mRNA | downstream | 356893 | 58998541 ~ 59085886 (-) | True | LOC103023855 |
| XM_007256627.3 | mRNA | downstream | 446017 | 58976662 ~ 58996762 (-) | True | ccm2 |
| XM_007256626.3 | mRNA | downstream | 446022 | 58976662 ~ 58996757 (-) | False | ccm2 |
| XM_007256643.3 | mRNA | upstream | 2509 | 59445511 ~ 59486743 (-) | False | LOC103027424 |
| XM_007256642.3 | mRNA | upstream | 2509 | 59445511 ~ 59486743 (-) | True | LOC103027424 |
| XM_022663793.1 | mRNA | upstream | 64239 | 59507241 ~ 59552910 (-) | True | snx17 |
| XM_022663798.1 | mRNA | upstream | 64239 | 59507241 ~ 59552909 (-) | False | snx17 |
| XM_022663802.1 | mRNA | upstream | 64239 | 59507241 ~ 59537576 (-) | False | snx17 |
| TU39539 | other | downstream | 4481 | 59437600 ~ 59438298 (-) | True | G29478 |
| TU39330 | other | downstream | 507990 | 58932963 ~ 58934789 (-) | True | G29317 |
| TU39086 | other | downstream | 1268075 | 58169321 ~ 58174704 (-) | False | LOC111189852 |
| XR_452898.2 | other | downstream | 2748654 | 56646027 ~ 56694125 (-) | False | LOC103031416 |
| TU38322 | other | downstream | 3626181 | 55815872 ~ 55816598 (-) | True | G28536 |
| TU39714 | other | upstream | 714536 | 60157538 ~ 60162024 (-) | False | LOC103034188 |
| XR_002649735.1 | other | upstream | 926044 | 60369046 ~ 60369614 (-) | True | LOC111191938 |
| XR_002649101.1 | other | upstream | 2390446 | 61833448 ~ 61887888 (-) | False | LOC103043586 |
| TU40670 | other | upstream | 3767279 | 63210281 ~ 63288108 (-) | False | fryl |
| TU40671 | other | upstream | 3767279 | 63210281 ~ 63256634 (-) | False | fryl |
