Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00001099 |
| length | 540 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 4 |
| gene id | XLOC_000646 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 51191049 ~ 51197601 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0048813 | dendrite morphogenesis | biological_process |
| GO:0022008 | neurogenesis | biological_process |
| GO:0005829 | cytosol | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-090312-7 | Predicted to be involved in dendrite morphogenesis. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human BTBD3 (BTB domain containing 3). |
| ensembl_id | ENSDART00000132244 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00001098 | lncRNA | upstream | 117921 | 51066816 ~ 51073128 (+) | True | XLOC_000645 |
| TCONS_00001095 | lncRNA | upstream | 148717 | 51039558 ~ 51042332 (+) | True | XLOC_000644 |
| TCONS_00003160 | lncRNA | upstream | 172498 | 51015858 ~ 51018551 (+) | True | XLOC_000643 |
| TCONS_00001091 | lncRNA | upstream | 207110 | 50977554 ~ 50983939 (+) | False | XLOC_000641 |
| TCONS_00003159 | lncRNA | upstream | 237491 | 50943592 ~ 50953558 (+) | True | XLOC_000640 |
| TCONS_00001114 | lncRNA | downstream | 284329 | 51479146 ~ 51481022 (+) | False | XLOC_000652 |
| TCONS_00002874 | lncRNA | downstream | 499934 | 51694751 ~ 51717215 (+) | True | XLOC_000656 |
| TCONS_00003161 | lncRNA | downstream | 558161 | 51752978 ~ 51826020 (+) | False | XLOC_000658 |
| TCONS_00001121 | lncRNA | downstream | 558308 | 51753125 ~ 51826020 (+) | False | XLOC_000658 |
| TCONS_00001122 | lncRNA | downstream | 628907 | 51823724 ~ 51826020 (+) | False | XLOC_000658 |
| TCONS_00001096 | mRNA | upstream | 117921 | 51066671 ~ 51073128 (+) | False | XLOC_000645 |
| TCONS_00001094 | mRNA | upstream | 148721 | 51039558 ~ 51042328 (+) | False | XLOC_000644 |
| TCONS_00001093 | mRNA | upstream | 175422 | 50997156 ~ 51015627 (+) | True | XLOC_000642 |
| TCONS_00001089 | mRNA | upstream | 200163 | 50976975 ~ 50990886 (+) | False | XLOC_000641 |
| TCONS_00001102 | mRNA | downstream | 26503 | 51221320 ~ 51229456 (+) | True | XLOC_000647 |
| TCONS_00001103 | mRNA | downstream | 117935 | 51312752 ~ 51375452 (+) | False | XLOC_000648 |
| TCONS_00001104 | mRNA | downstream | 134252 | 51329069 ~ 51370639 (+) | False | XLOC_000648 |
| TCONS_00001106 | mRNA | downstream | 134252 | 51329069 ~ 51375452 (+) | False | XLOC_000648 |
| TCONS_00001105 | mRNA | downstream | 134252 | 51329069 ~ 51375452 (+) | False | XLOC_000648 |
| TCONS_00001097 | other | upstream | 117942 | 51066782 ~ 51073107 (+) | False | XLOC_000645 |
| TCONS_00001084 | other | upstream | 336571 | 50854364 ~ 50854478 (+) | True | XLOC_000638 |
| TCONS_00001079 | other | upstream | 1059040 | 50131158 ~ 50132009 (+) | True | XLOC_000630 |
| TCONS_00001068 | other | upstream | 1475227 | 49699903 ~ 49715822 (+) | False | XLOC_000626 |
| TCONS_00001057 | other | upstream | 1600226 | 49590701 ~ 49590823 (+) | True | XLOC_000623 |
| TCONS_00001111 | other | downstream | 270651 | 51465468 ~ 51465582 (+) | True | XLOC_000651 |
| TCONS_00001119 | other | downstream | 488702 | 51683519 ~ 51683618 (+) | True | XLOC_000655 |
| TCONS_00001126 | other | downstream | 935347 | 52130164 ~ 52135502 (+) | False | XLOC_000662 |
| TCONS_00001154 | other | downstream | 1805015 | 52999832 ~ 53061197 (+) | False | XLOC_000682 |
| TCONS_00001160 | other | downstream | 2169693 | 53364510 ~ 53368034 (+) | True | XLOC_000689 |
