RNA id: CI01000004_07751113_07751701.mRNA



Basic Information


Item Value
RNA id CI01000004_07751113_07751701.mRNA
length 1178
RNA type mRNA
GC content 0.38
exon number 2
gene id CI01000004_07751113_07751701
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7750451 ~ 7751755 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGTACCTGAACACACTTGAAAATTGTGTACTAATTGATCACCCCAAGAAACACCATGAACATTAAGTGGTTTGCTTGTTTAGCTTTTTTAATTCTCCTCGAGACTTCCAAGACTGAGAGTCAAGATGTACGAGTGAAGCTCTGTGGTCGTGAGTTCATTCGGATGGTGGTCACATCATGTGGGAGCTCTCGACTCAAACGGAATGTGCTTGATTCAGACTTTCACTTTGCAAACCCCCATAGGAACCTACAAAACTGGCTGGACAGAGATCTCTTTGCACGCCAGAAATGGACCCCGACTGCTGAGGACGAGCAGTGGCGAGAGCACGGTGCCCCTGAGAGCGTGACAGAGCATCCAGCCCCCTACCAGCACACGAGCCCCCCAGCAGAGCTTCTGGAACACTCCACCACTGTGCAGGATCTCAGCATGTCCTCCAGGACCCGTCGCGATGTCGGGCCAGCGGGCGTCTGCTGTACTTCTGGATGTACCATGAGTGAACTGATTCAGTACTGCTAAGTTCACACCAAATCTCCTAGGACAGATATAGATATATAGATACACATATTAACACTTTACAACAAGATTCCATTTGTTAGCATTAGTTAATTAACATAAACTAAAAATAAAAAATATACTAAAGCATTTATTAACCTTAGTTAATTTTAATTTCAGCATTACTAATATTAAAATCAAAAGTTGTATCTGTTAATGTTATTTAATACAGTTGTAATTTTATTAACTAACGTTAACAAAGATTAATAAATACTGTCATTGCTGGTTCATGTAAGTTAATATATTACCTAATGTTAACCAATGGGAACTTATTGTAAATTATTACCTTCATTATGAATGTTGGTGCAGGATGTATGCATGAAATCGAATGAAAAGAGTGTTATTTTATATTTTATAGTATAAGCTTTTGATTATAGTTGATCAGTTGTGATATGTTTAGATACATATTTTAGATGGCTCATATAGCCTACAGAAATTGACTGGTTATCTGATTGGTCAGTGATTTCAGTAACGGATGACACTGACAGGGAACTTTGTGCAATGAATCCAAAGAATCAAAGATAATATCTGGTATAATCTTTGGTAAATGTAGCCTGCTTTTTGAGATAATTGAACTTGCAGGCTGTATGTTTGATCAATGACACTAAATTTATTCTCAGAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU33505 lncRNA downstream 84457 7665757 ~ 7665994 (-) True G29598
TU33482 lncRNA downstream 196118 7552532 ~ 7554333 (-) True G29575
TU33474 lncRNA downstream 220116 7530126 ~ 7530335 (-) True G29568
TU33217 lncRNA downstream 362595 7387581 ~ 7387856 (-) True G29343
TU33205 lncRNA downstream 363054 7385073 ~ 7387397 (-) True G29334
TU33457 lncRNA upstream 7903 7759658 ~ 7761020 (-) True G29551
TU33449 lncRNA upstream 23518 7775273 ~ 7780067 (-) False G29544
TU33450 lncRNA upstream 23518 7775273 ~ 7780067 (-) True G29544
TU33446 lncRNA upstream 46795 7798550 ~ 7800281 (-) True G29542
TU33462 lncRNA upstream 48692 7800447 ~ 7800752 (-) True G29556
CI01000004_07712568_07742293.mRNA mRNA downstream 8158 7712478 ~ 7742293 (-) True CI01000004_07712568_07742293
CI01000004_07705722_07707545.mRNA mRNA downstream 42606 7705707 ~ 7707845 (-) True CI01000004_07705722_07707545
CI01000004_07693733_07699887.mRNA mRNA downstream 50564 7693484 ~ 7699887 (-) True CI01000004_07693733_07699887
CI01000004_07670856_07673369.mRNA mRNA downstream 76499 7670512 ~ 7673952 (-) True CI01000004_07670856_07673369
CI01000004_07656773_07666677.mRNA mRNA downstream 83774 7656191 ~ 7666677 (-) True CI01000004_07656773_07666677
CI01000004_07755406_07758041.mRNA mRNA upstream 3412 7755167 ~ 7758041 (-) True CI01000004_07755406_07758041
CI01000004_07784930_07788318.mRNA mRNA upstream 31929 7783684 ~ 7788507 (-) True CI01000004_07784930_07788318
CI01000004_07792267_07797908.mRNA mRNA upstream 40143 7791898 ~ 7798462 (-) True CI01000004_07792267_07797908
CI01000004_07805884_07817962.mRNA mRNA upstream 53898 7805653 ~ 7818936 (-) True CI01000004_07805884_07817962
CI01000004_07829094_07830772.mRNA mRNA upstream 77248 7829003 ~ 7830813 (-) True CI01000004_07829094_07830772
TU33263 other downstream 1118544 6631293 ~ 6631907 (-) True G29388
TU33056 other downstream 1204879 6534827 ~ 6545572 (-) True G29204
TU31692 other downstream 2122937 5620383 ~ 5627514 (-) True CI01000004_05617072_05627369
TU31341 other downstream 2546727 5178227 ~ 5203724 (-) False G27746
TU33567 other upstream 212609 7964364 ~ 7965500 (-) True G29656
TU33669 other upstream 602743 8354498 ~ 8358127 (-) False G29746
TU33670 other upstream 602743 8354498 ~ 8358127 (-) True G29746
TU34309 other upstream 1626182 9377937 ~ 9406921 (-) True G30316
TU35313 other upstream 2994682 10746437 ~ 10750641 (-) True G31203

Expression Profile