RNA id: TU33320


Basic Information

Item Value
RNA id TU33320
length 205
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G29441
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6964133 ~ 6964337 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TAACAAGAAAACACACTTGAGAACTCGATCCATCCGCAGTCCTCAATCAGAACTCTGTGGGAAAGTGTAATTCCTCCTCACTGTAAACCTCTTATCCTCTCAGCACAAAACTTTGTCTATGATGAATTATGATCTGTTTTCAAGAGCACAGTTAATAAAACACGAACGTGACCTCAACAGAAGGCTATTCACAACAACAGGAGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33202 lncRNA downstream 2644 6957988 ~ 6958437 (-) True G29331
TU33310 lncRNA downstream 66878 6897021 ~ 6897255 (-) True G29433
TU33290 lncRNA downstream 67183 6821967 ~ 6896950 (-) True G29414
TU33226 lncRNA downstream 88270 6872572 ~ 6875863 (-) True G29351
TU33179 lncRNA downstream 122558 6831706 ~ 6841575 (-) True G29315
TU33334 lncRNA upstream 13049 6977386 ~ 6977609 (-) True G29451
TU33359 lncRNA upstream 133405 7097742 ~ 7097980 (-) True G29476
TU33233 lncRNA upstream 184845 7149182 ~ 7150510 (-) True G29358
TU33381 lncRNA upstream 293402 7257739 ~ 7257963 (-) True CI01000004_07256668_07257382
TU33383 lncRNA upstream 294868 7259205 ~ 7259458 (-) True G29492
CI01000004_06960750_06963258.mRNA mRNA downstream 851 6960675 ~ 6963282 (-) False CI01000004_06960750_06963258
CI01000004_06915152_06921193.mRNA mRNA downstream 42940 6914589 ~ 6921193 (-) True CI01000004_06915152_06921193
CI01000004_06827636_06828127.mRNA mRNA downstream 135769 6827444 ~ 6828364 (-) False CI01000004_06827636_06828127
CI01000004_06805399_06814604.mRNA mRNA downstream 149529 6805217 ~ 6814604 (-) True CI01000004_06805399_06814604
CI01000004_06677179_06740196.mRNA mRNA downstream 223937 6677179 ~ 6740196 (-) True CI01000004_06677179_06740196
CI01000004_07008022_07016495.mRNA mRNA upstream 43491 7007828 ~ 7017478 (-) True CI01000004_07008022_07016495
CI01000004_07024832_07032532.mRNA mRNA upstream 59356 7023693 ~ 7033161 (-) True CI01000004_07024832_07032532
CI01000004_07055639_07067152.mRNA mRNA upstream 91073 7055410 ~ 7067152 (-) True CI01000004_07055639_07067152
CI01000004_07091217_07093407.mRNA mRNA upstream 126863 7091200 ~ 7093407 (-) True CI01000004_07091217_07093407
CI01000004_07102190_07122451.mRNA mRNA upstream 136708 7101045 ~ 7122451 (-) True CI01000004_07102190_07122451
TU33263 other downstream 332226 6631293 ~ 6631907 (-) True G29388
TU33056 other downstream 418561 6534827 ~ 6545572 (-) True G29204
TU31692 other downstream 1336619 5620383 ~ 5627514 (-) True CI01000004_05617072_05627369
TU31341 other downstream 1760409 5178227 ~ 5203724 (-) False G27746
TU33567 other upstream 1000027 7964364 ~ 7965500 (-) True G29656
TU33669 other upstream 1390161 8354498 ~ 8358127 (-) False G29746
TU33670 other upstream 1390161 8354498 ~ 8358127 (-) True G29746
TU34309 other upstream 2413600 9377937 ~ 9406921 (-) True G30316
TU35313 other upstream 3782100 10746437 ~ 10750641 (-) True G31203

Expression Profile