RNA id: TU74216


Basic Information

Item Value
RNA id TU74216
length 206
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G65201
representative True

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 7006043 ~ 7006248 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGTGACCCTCATCCAGCCCTGGTGCTGACAGCGGGTGATGTATGGTGACATAGTAATAGGACCACTAAACATGTTGTCAGCACTTTTCAACATGTAACGTTCATTTGCACACCTGAAGGACGCCTCATAATGACAAAATGCGGCGTCAAAATTAACTTTTGGATAATGTAAAACGAATGACGCTGGTTTGCGCGTGCAGATTTTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74199 lncRNA downstream 20218 6980270 ~ 6985825 (-) True G65189
TU74178 lncRNA downstream 53298 6952338 ~ 6952745 (-) True G65177
TU74128 lncRNA downstream 57036 6947391 ~ 6949007 (-) True G65132
TU74127 lncRNA downstream 60447 6945179 ~ 6945596 (-) True G65131
TU74098 lncRNA downstream 201695 6741744 ~ 6804348 (-) True G65102
TU74163 lncRNA upstream 43484 7049732 ~ 7049753 (-) True G65164
TU74266 lncRNA upstream 189567 7195815 ~ 7200800 (-) True CI01000010_07135276_07196633
TU74359 lncRNA upstream 231085 7237333 ~ 7268076 (-) True G65336
TU74382 lncRNA upstream 263971 7270219 ~ 7270583 (-) True G65359
TU74387 lncRNA upstream 268163 7274411 ~ 7275112 (-) True G65364
CI01000010_06704532_06716191.mRNA mRNA downstream 289852 6704422 ~ 6716191 (-) True CI01000010_06704532_06716191
CI01000010_06690142_06698430.mRNA mRNA downstream 307501 6689995 ~ 6698542 (-) True CI01000010_06690142_06698430
CI01000010_06681043_06685375.mRNA mRNA downstream 320668 6680763 ~ 6685375 (-) True CI01000010_06681043_06685375
CI01000010_06639960_06641129.mRNA mRNA downstream 364904 6639580 ~ 6641139 (-) True CI01000010_06639960_06641129
CI01000010_06625010_06627729.mRNA mRNA downstream 378314 6624190 ~ 6627729 (-) True CI01000010_06625010_06627729
CI01000010_07013266_07023918.mRNA mRNA upstream 6832 7013080 ~ 7026333 (-) True CI01000010_07013266_07023918
CI01000010_07051047_07053923.mRNA mRNA upstream 44545 7050793 ~ 7053923 (-) False CI01000010_07051047_07053923
CI01000010_07128701_07132022.mRNA mRNA upstream 122414 7128662 ~ 7132068 (-) True CI01000010_07128701_07132022
CI01000010_07135276_07196633.mRNA mRNA upstream 128143 7134391 ~ 7196633 (-) False CI01000010_07135276_07196633
CI01000010_07320443_07334877.mRNA mRNA upstream 313568 7319816 ~ 7334993 (-) True CI01000010_07320443_07334877
TU73887 other downstream 909563 6093689 ~ 6096480 (-) False G64918
TU73846 other downstream 1089032 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 1763117 5049155 ~ 5242926 (-) True G64564
TU73132 other downstream 2392487 4613485 ~ 4613556 (-) True G64230
TU73142 other downstream 2769627 4229950 ~ 4236416 (-) False G64237
TU74496 other upstream 657443 7663691 ~ 7672343 (-) False G65453
TU74478 other upstream 836388 7842636 ~ 7873650 (-) True G65441
TU76444 other upstream 1635442 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 4922713 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223
TU77396 other upstream 4958617 11968202 ~ 11968254 (-) True G67957

Expression Profile