RNA id: TU74098



Basic Information


Item Value
RNA id TU74098
length 339
lncRNA type inter_gene
GC content 0.32
exon number 3
gene id G65102
representative True

Chromosome Information


Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 6741744 ~ 6804348 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GCCAATACAGCCATTTCATTTGTGATTAAAATATCTTAAAATGTAATAAATGTATATATTTTTTATTCTGGCATTATTTTATAACATCATATATCAACAGAGTGTTAAAATTATGTGTAGAAGTCGTTGCTTTGTTATGAGAAAGAATGTCCGGAAAAATGAATTTCATTGATGTCATTCGGAGTAACCAATATAAAGGGACCATTTTGGATCAAGTCATGTGATCAATATCATGTGACAGGATGTGACATCATTCAGACACCTGCAAAGGACCACATGGTCGTGAAGCAAAGTAACTAACTCTCTCTTAACTGTTTGAAAAATTCATGTTTTCACTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73964 lncRNA downstream 6162 6729558 ~ 6735582 (-) True G64981
TU73951 lncRNA downstream 13253 6547764 ~ 6728491 (-) True G64969
TU74076 lncRNA downstream 93574 6647532 ~ 6648170 (-) True G65082
TU74038 lncRNA downstream 209088 6496859 ~ 6532656 (-) False G65047
TU74127 lncRNA upstream 140831 6945179 ~ 6945596 (-) True G65131
TU74128 lncRNA upstream 143043 6947391 ~ 6949007 (-) True G65132
TU74178 lncRNA upstream 147990 6952338 ~ 6952745 (-) True G65177
TU74199 lncRNA upstream 175922 6980270 ~ 6985825 (-) True G65189
TU74216 lncRNA upstream 201695 7006043 ~ 7006248 (-) True G65201
CI01000010_06704532_06716191.mRNA mRNA downstream 25553 6704422 ~ 6716191 (-) True CI01000010_06704532_06716191
CI01000010_06690142_06698430.mRNA mRNA downstream 43202 6689995 ~ 6698542 (-) True CI01000010_06690142_06698430
CI01000010_06681043_06685375.mRNA mRNA downstream 56369 6680763 ~ 6685375 (-) True CI01000010_06681043_06685375
CI01000010_06639960_06641129.mRNA mRNA downstream 100605 6639580 ~ 6641139 (-) True CI01000010_06639960_06641129
CI01000010_06625010_06627729.mRNA mRNA downstream 114015 6624190 ~ 6627729 (-) True CI01000010_06625010_06627729
CI01000010_07013266_07023918.mRNA mRNA upstream 208732 7013080 ~ 7026333 (-) True CI01000010_07013266_07023918
CI01000010_07051047_07053923.mRNA mRNA upstream 246445 7050793 ~ 7053923 (-) False CI01000010_07051047_07053923
CI01000010_07128701_07132022.mRNA mRNA upstream 324314 7128662 ~ 7132068 (-) True CI01000010_07128701_07132022
CI01000010_07135276_07196633.mRNA mRNA upstream 330043 7134391 ~ 7196633 (-) False CI01000010_07135276_07196633
CI01000010_07320443_07334877.mRNA mRNA upstream 515468 7319816 ~ 7334993 (-) True CI01000010_07320443_07334877
TU73887 other downstream 645264 6093689 ~ 6096480 (-) False G64918
TU73846 other downstream 824733 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 1498818 5049155 ~ 5242926 (-) True G64564
TU73132 other downstream 2128188 4613485 ~ 4613556 (-) True G64230
TU73142 other downstream 2505328 4229950 ~ 4236416 (-) False G64237
TU74496 other upstream 859343 7663691 ~ 7672343 (-) False G65453
TU74478 other upstream 1038288 7842636 ~ 7873650 (-) True G65441
TU76444 other upstream 1837342 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 5124613 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223
TU77396 other upstream 5160517 11968202 ~ 11968254 (-) True G67957

Expression Profile