RNA id: TU74038


Basic Information

Item Value
RNA id TU74038
length 619
lncRNA type read_through
GC content 0.32
exon number 2
gene id G65047
representative False

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 6496859 ~ 6532656 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAAAAAAAATCAAAAAATGGCTTCTTTAAGCAAAAATCAGTATTTAGTGTGACCTGCTGGACTTCTTCCATTTTCTCAAAGAAGAAACTCTGAGAAACTTCTCATCATATTTTGAAAGTTTTTTTTGGTCTTCTAGTCATTTTCCATTCCATTTAATTTAAGAAAGCCGGTTCCTGCTATTGCTCAAGTGTAAGGGAGGTCACTAAATACTTGCCACTTTAGCCTATAGAAGTAGTTTTTGTTTTTTGTTTTTTTAATACTGCATATAAATGTCCTGTATTTTCTGGTTATATTCTAATAAGGAGACTGAGAAATAATTATATATGGTCATTATACCATTGCTAAACAACATCTATTGGTAGCCTAAGACTTTTGCACAGTACTGTATGTGTGTCTGTGTGTGTGTGTATATATATATTAGTCAAACCAAAAATTATCCAGACATTTCTGATATATTTTTTACTAGTGGGTGCAGGACACTATAGTTCATTTATGTAAGTGGGGATAACAAAAAGTAAACGGTGACATATTATACCCAAAAATTCTTCATACAGTGGACTACCAGTAAAATTGATAAAAACTTGGAACCAAAAATTATTCAGACACTTTGACCTGACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74029 lncRNA downstream 914 6495479 ~ 6495945 (-) True G65046
TU74028 lncRNA downstream 1779 6494438 ~ 6495080 (-) True G65045
TU74024 lncRNA downstream 57777 6438865 ~ 6439082 (-) True G65041
TU74023 lncRNA downstream 66470 6430189 ~ 6430389 (-) True G65040
TU74022 lncRNA downstream 67100 6429543 ~ 6429759 (-) True G65039
TU73951 lncRNA upstream 15108 6547764 ~ 6728491 (-) True G64969
TU74076 lncRNA upstream 114876 6647532 ~ 6648170 (-) True G65082
TU73964 lncRNA upstream 196902 6729558 ~ 6735582 (-) True G64981
TU74098 lncRNA upstream 209088 6741744 ~ 6804348 (-) True G65102
TU74127 lncRNA upstream 412523 6945179 ~ 6945596 (-) True G65131
CI01000010_06456276_06481282.mRNA mRNA downstream 15432 6456276 ~ 6481427 (-) True CI01000010_06456276_06481282
CI01000010_06253230_06263855.mRNA mRNA downstream 233004 6252366 ~ 6263855 (-) True CI01000010_06253230_06263855
CI01000010_06180084_06216445.mRNA mRNA downstream 280414 6180084 ~ 6216445 (-) True CI01000010_06180084_06216445
CI01000010_06107283_06108881.mRNA mRNA downstream 387870 6105579 ~ 6108989 (-) True CI01000010_06107283_06108881
CI01000010_06083696_06089271.mRNA mRNA downstream 407285 6083543 ~ 6089574 (-) True CI01000010_06083696_06089271
CI01000010_06588155_06615737.mRNA mRNA upstream 54564 6587220 ~ 6615737 (-) True CI01000010_06588155_06615737
CI01000010_06625010_06627729.mRNA mRNA upstream 91534 6624190 ~ 6627729 (-) True CI01000010_06625010_06627729
CI01000010_06639960_06641129.mRNA mRNA upstream 106924 6639580 ~ 6641139 (-) True CI01000010_06639960_06641129
CI01000010_06681043_06685375.mRNA mRNA upstream 148107 6680763 ~ 6685375 (-) True CI01000010_06681043_06685375
CI01000010_06690142_06698430.mRNA mRNA upstream 157339 6689995 ~ 6698542 (-) True CI01000010_06690142_06698430
TU73887 other downstream 400379 6093689 ~ 6096480 (-) False G64918
TU73846 other downstream 579848 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 1253933 5049155 ~ 5242926 (-) True G64564
TU73132 other downstream 1883303 4613485 ~ 4613556 (-) True G64230
TU73142 other downstream 2260443 4229950 ~ 4236416 (-) False G64237
TU74496 other upstream 1131035 7663691 ~ 7672343 (-) False G65453
TU74478 other upstream 1309980 7842636 ~ 7873650 (-) True G65441
TU76444 other upstream 2109034 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 5396305 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223
TU77396 other upstream 5432209 11968202 ~ 11968254 (-) True G67957

Expression Profile