Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000010_06588155_06615737.mRNA |
| length | 6818 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 42 |
| gene id | CI01000010_06588155_06615737 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000010 |
| NCBI id | null |
| chromosome length | 12265998 |
| location | 6587220 ~ 6615737 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0007160 | cell-matrix adhesion | biological_process |
| id | description |
|---|---|
| K06525 | ITGB4, CD104; integrin beta 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU74038 | lncRNA | downstream | 54564 | 6496859 ~ 6532656 (-) | False | G65047 |
| TU74033 | lncRNA | downstream | 68059 | 6497634 ~ 6519161 (-) | True | G65047 |
| TU74042 | lncRNA | downstream | 76600 | 6507831 ~ 6510620 (-) | True | G65049 |
| TU74032 | lncRNA | downstream | 87066 | 6497634 ~ 6500154 (-) | False | G65047 |
| TU74029 | lncRNA | downstream | 91275 | 6495479 ~ 6495945 (-) | True | G65046 |
| TU74076 | lncRNA | upstream | 31795 | 6647532 ~ 6648170 (-) | True | G65082 |
| TU73964 | lncRNA | upstream | 113821 | 6729558 ~ 6735582 (-) | True | G64981 |
| TU74098 | lncRNA | upstream | 126007 | 6741744 ~ 6804348 (-) | True | G65102 |
| TU74127 | lncRNA | upstream | 329442 | 6945179 ~ 6945596 (-) | True | G65131 |
| TU74128 | lncRNA | upstream | 331654 | 6947391 ~ 6949007 (-) | True | G65132 |
| CI01000010_06504062_06505040.mRNA | mRNA | downstream | 81944 | 6503983 ~ 6505276 (-) | True | CI01000010_06504062_06505040 |
| CI01000010_06456276_06481282.mRNA | mRNA | downstream | 105793 | 6456276 ~ 6481427 (-) | True | CI01000010_06456276_06481282 |
| CI01000010_06253230_06263855.mRNA | mRNA | downstream | 323365 | 6252366 ~ 6263855 (-) | True | CI01000010_06253230_06263855 |
| CI01000010_06180084_06216445.mRNA | mRNA | downstream | 370775 | 6180084 ~ 6216445 (-) | True | CI01000010_06180084_06216445 |
| CI01000010_06107283_06108881.mRNA | mRNA | downstream | 478231 | 6105579 ~ 6108989 (-) | True | CI01000010_06107283_06108881 |
| CI01000010_06625010_06627729.mRNA | mRNA | upstream | 8453 | 6624190 ~ 6627729 (-) | True | CI01000010_06625010_06627729 |
| CI01000010_06639960_06641129.mRNA | mRNA | upstream | 23843 | 6639580 ~ 6641139 (-) | True | CI01000010_06639960_06641129 |
| CI01000010_06681043_06685375.mRNA | mRNA | upstream | 65026 | 6680763 ~ 6685375 (-) | True | CI01000010_06681043_06685375 |
| CI01000010_06690142_06698430.mRNA | mRNA | upstream | 74258 | 6689995 ~ 6698542 (-) | True | CI01000010_06690142_06698430 |
| CI01000010_06704532_06716191.mRNA | mRNA | upstream | 88685 | 6704422 ~ 6716191 (-) | True | CI01000010_06704532_06716191 |
| TU73887 | other | downstream | 490740 | 6093689 ~ 6096480 (-) | False | G64918 |
| TU73846 | other | downstream | 670209 | 5916257 ~ 5917011 (-) | True | G64877 |
| TU73495 | other | downstream | 1344294 | 5049155 ~ 5242926 (-) | True | G64564 |
| TU73132 | other | downstream | 1973664 | 4613485 ~ 4613556 (-) | True | G64230 |
| TU73142 | other | downstream | 2350804 | 4229950 ~ 4236416 (-) | False | G64237 |
| TU74496 | other | upstream | 1047954 | 7663691 ~ 7672343 (-) | False | G65453 |
| TU74478 | other | upstream | 1226899 | 7842636 ~ 7873650 (-) | True | G65441 |
| TU76444 | other | upstream | 2025953 | 8641690 ~ 8674897 (-) | True | G67099 |
| TU77386 | other | upstream | 5313224 | 11928961 ~ 11932254 (-) | True | CI01000010_11929215_11933223 |
| TU77396 | other | upstream | 5349128 | 11968202 ~ 11968254 (-) | True | G67957 |
